odfWeave is throwing up a cryptic error, after successfully processing a
file with a large number of figures (~30) and many \Sexpr{} calls. The
error is (at least to me) cryptic. I am not sure where to look to
correct this problem.
Here's the error:
Post-processing the contents
Error in .Call("RS_XML_Parse", file, handlers, endElementHandlers,
as.logical(addContext), :
attempt to apply non-function
Is there any way to figure out what this means, or where I might look
for the error in the source?
Here's a capture of the associated log. I am running R 2.8 under Ubuntu
8.04.
Thanks,
> odfWeave("/home/rob/Trauma/Report_2_draft.odt",
"/home/rob/Trauma/Report_2_draft_out.odt")
Copying /home/rob/Trauma/Report_2_draft.odt
Setting wd to /tmp/Rtmp2tlRz0/odfWeave23115040235
Unzipping ODF file using unzip -o Report_2_draft.odt
Archive: Report_2_draft.odt
extracting: mimetype
creating: Configurations2/statusbar/
inflating: Configurations2/accelerator/current.xml
creating: Configurations2/floater/
creating: Configurations2/popupmenu/
creating: Configurations2/progressbar/
creating: Configurations2/menubar/
creating: Configurations2/toolbar/
creating: Configurations2/images/Bitmaps/
inflating: layout-cache
inflating: content.xml
inflating: styles.xml
extracting: meta.xml
inflating: Thumbnails/thumbnail.png
inflating: settings.xml
inflating: META-INF/manifest.xml
Removing Report_2_draft.odt
Creating a Pictures directory
Pre-processing the contents
Sweaving content.Rnw
Writing to file content_1.xml
Processing code chunks ...
1 : term hide(label=loadData)
d 2 : term verbatim(label=SiteHist)
ate()
3 : term verbatim(label=AgeSex)
4 : term verbatim(label=Sitesex)
5 : term verbatim(label=SiteHeadNeck)
6 : term verbatim(label=SiteFace)
7 : term verbatim(label=SiteChest)
8 : term verbatim(label=SiteAbdomnen)
9 : term verbatim(label=SiteGCS_Eyes)
10 : term verbatim(label=SiteGCS_Verbal)
11 : term verbatim(label=SiteGCS_Motor)
12 : term verbatim(label=SiteGCS_total)
13 : term verbatim(label=SBP)
14 : term verbatim(label=DBP)
15 : term verbatim(label=HR)
16 : term verbatim(label=RESPIRATION)
17 : term verbatim(label=PF_ADMIT)
18 : term verbatim(label=O2_admit)
19 : term verbatim(label=Ph_admit)
20 : term verbatim(label=DEFICIT)
21 : term verbatim(label=lactic_acid)
'content_1.xml' has been Sweaved
Removing content.xml
Post-processing the contents
Error in .Call("RS_XML_Parse", file, handlers, endElementHandlers,
as.logical(addContext), :
attempt to apply non-function
In addition: There were 50 or more warnings (use warnings() to see the
first 50)
> date()
[1] "Thu Oct 23 12:18:18 2008"
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