On Mon, 26 Jan 2009, Adam D. I. Kramer wrote:


On Mon, 26 Jan 2009, Charles C. Berry wrote:


 If you know what a 'general linear hypothesis test' is see

  http://cran.r-project.org/src/contrib/Archive/hpower/hpower_0.1-0.tar.gz


I do, and am quite interested, however this package will not install on R
2.8.1: First, it said that there was no "maintainer" in the description, so
I added one (figuring that the 1991 date of the package was to blame),
however it still will not compile:

parmesan:tmp$ sudo R CMD INSTALL hpower/
* Installing to library '/usr/local/lib/R/library'
* Installing *source* package 'hpower' ...
** R
** preparing package for lazy loading
Error in parse(n = -1, file = file) : unexpected '{' at
5: ##
6: pfnc_function(q,df1,df2,lm,iprec=c(6)) {
_________^_________

AHA!

That underscore is the old 'assignment' operator - now no longer allowed.

Do a global replace of '_' with ' <- ' in the R/*.R files and it should install.

HTH,

Chuck


Calls: <Anonymous> -> code2LazyLoadDB -> sys.source -> parse
Execution halted
ERROR: lazy loading failed for package 'hpower'
** Removing '/usr/local/lib/R/library/hpower'
parmesan:tmp$

...any tips?

--Adam

 HTH,

 Chuck

 On Mon, 26 Jan 2009, Adam D. I. Kramer wrote:

> > On Mon, 26 Jan 2009, Stephan Kolassa wrote: > > > My (and, judging from previous traffic on R-help about power > > analyses,
> >   also some other people's) preferred approach is to simply simulate an
> > effect size you would like to detect a couple of thousand times, run > > your > > proposed analysis and look how often you get significance. In your > > simple
> >   case, this should be quite easy.
> > I actually don't have much experience running monte-carlo designs like > this...so while I'd certainly prefer a bootstrapping method like this > one, > simulating the effect size given my constraints isn't something I've > done
>  before.
> > The MANOVA procedure takes 5 dependent variables, and determines what
>  combination of the variables best discriminates the two levels of my
> independent variable...then the discrimination rate is represented in > the > statistic (Pillai's V=.00019), which is then tested (F[5,18653] = 0.71). > So
>  coming up with a set of constraints that would produce V=.00019 given my
>  data set doesn't quite sound trivial...so I'll go for the "par" library
>  reference mentioned earlier before I try this.  That said, if anyone can
> refer me to a tool that will help me out (or an instruction manual for > RNG),
>  I'd also be much obliged.
> > Many thanks,
>  Adam
> > > > > > HTH,
> >   Stephan
> > > > > > Adam D. I. Kramer schrieb:
> > >   Hello,
> > > > I have searched and failed for a program or script or method > > > > to > > > conduct a power analysis for a MANOVA. My interest is a fairly > > > simple > > > case > > > of 5 dependent variables and a single two-level categorical > > > predictor
> > >   (though the categories aren't balanced).
> > > > If anybody happens to know of a script that will do this in > > > > R, > > I'd
> > >   love to know of it! Otherwise, I'll see about writing one myself.
> > > >       What I currently see is this, from help.search("power"):
> > > >   stats::power.anova.test
> > >                           Power calculations for balanced one-way
> > >                           analysis of variance tests
> > >   stats::power.prop.test
> > >                           Power calculations two sample test for
> > >                           proportions
> > >   stats::power.t.test     Power calculations for one and two sample t
> > >                           tests
> > > > Any references on power in MANOVA would also be helpful, > > > > though > > of
> > >   course I will do my own lit search for them myself.
> > > >   Cordially,
> > >   Adam D. I. Kramer
> > > >   ______________________________________________
> > >   R-help@r-project.org mailing list
> > >   https://stat.ethz.ch/mailman/listinfo/r-help
> > > PLEASE do read the posting guide > > > http://www.R-project.org/posting-guide.html
> > >   and provide commented, minimal, self-contained, reproducible code.
> > > > > > > ______________________________________________
>  R-help@r-project.org mailing list
>  https://stat.ethz.ch/mailman/listinfo/r-help
> PLEASE do read the posting guide > http://www.R-project.org/posting-guide.html
>  and provide commented, minimal, self-contained, reproducible code.
> >
 Charles C. Berry                            (858) 534-2098
                                            Dept of Family/Preventive
 Medicine
 E mailto:cbe...@tajo.ucsd.edu              UC San Diego
 http://famprevmed.ucsd.edu/faculty/cberry/  La Jolla, San Diego 92093-0901






Charles C. Berry                            (858) 534-2098
                                            Dept of Family/Preventive Medicine
E mailto:cbe...@tajo.ucsd.edu               UC San Diego
http://famprevmed.ucsd.edu/faculty/cberry/  La Jolla, San Diego 92093-0901

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