On Wed, 18 Feb 2009, jjh21 wrote:


Hello,

I know that two possible approaches to dealing with clustered data would be
GEE or a robust cluster covariance matrix from a standard regression. What
are the differences between these two methods, or are they doing the same
thing? Thanks.

There are two components to 'GEE'. The first is the robust cluster (or 
'sandwich') covariance, the second is the ability to choose a weight matrix to 
get higher efficiency ('working correlation').

Using the 'independence working correlation' asks for the same weighting as in 
ordinary regression, so the estimates are the same as in standard regression, 
and then the standard errors are the same as the 'robust cluster' ones (up to 
factors of n/(n-1) and similar implementation details). The standard errors are 
also the same as the Horvitz-Thompson estimator gives for cluster sampling from 
an infinite population, and they are also the same as an approximation to the 
cluster jackknife standard errors where a cluster is downweighted slightly 
rather than removed.

      -thomas

Thomas Lumley                   Assoc. Professor, Biostatistics
tlum...@u.washington.edu        University of Washington, Seattle

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