Greg <chaoborid <at> gmail.com> writes: > > You could try 'vegdist()' in the 'vegan' package. > > Yep, you could. However, if you want to have Jaccard for binary data although your data are not binary, you must set binary = TRUE in vegan::vegdist.
Indeed, the greatest problem with recommending Jaccard is that there is a huge number of packages that have this index, and you probably forget some of those in any recommendation. I think at least the following packages have Jaccard index: ade4, analogue, ecodist, labdsv and probably many more. Cheers, Jari Oksanen ______________________________________________ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
