Hi,
It's not enough to create a string with your instructions, it also needs to
be evaluated as such.
If you really wanted to evaluate your string, you'd need something like,
a <- b <- cc <- 1 # dummy example
eval(parse(text = "cbind(a, b, cc)"))
#library(fortunes)
#fortune("parse")
but fortune-ately, you probably oughtn't do that. Instead, I think you could
use this example,
d = data.frame(a1=1:10, b1=sin(1:10), c1 = cos(1:10)) # some data.frame
variables = paste(letters[1:3],"1",sep="") # its variable names
(alternatively, names(d) would do)
ICC = function(x) x # your function
ICC(d[ variables[ c(1, 3) ] ]) # apply the function to a subset of the data,
by selecting the required columns
(If I understood correctly your question)
HTH,
baptiste
2009/9/7 Helter Two <helter...@care2.com>
> R-2.9.1, Windows7
>
> Dear list,
>
> I have a question to you that seems very simple to me, but I just can't
> figure it out.
> I have a dataframe called "ratings" which contains the following
> variables: evalR1, evalR2, evalR3, evalR4, scoreR1, scoreR2, scoreR3,
> scoreR4, opinionR1, opinionR2, opinionR3, opinionR4. (there are more
> variables, but this gives an idea of the data structure).
>
> What I want is run several analyses on all 3 or 4-combinations of a
> given variable. So, for example, I want to compute the following ICC's
> (function from the psych package):
> ICC(cbind(evalR1,evalR2, evalR3))
> ICC(cbind(evalR1,evalR2, evalR4))
> ICC(cbind(evalR1, evalR3, evalR4))
> ICC(cbind(evalR2, evalR3, evalR4))
> ICC(cbind(evalR1, evalR2, evalR3, eval4)).
>
> I create a matrix containing the 3-combinations by combn(4,3). Now I
> need to call the variables into the function.
> First, I tried paste as follows:
> combis <- combn(4,3) # this gives the 3-combinations
> attach(ratings)
> eval <-
> paste("evalR",combis[1,1],",evalR",combis[2,1],",evalR","combis[3,1],sep
> ="")
> (this is of course just for 1 combination, as an example)
> the output of this is "evalR1,"evalR2,evalR3", but when I run
> ICC(cbind(eval)), an error message is given which is not given when I
> enter ICC(cbind(evalR1,evalR2, evalR3)) manually. The function appears
> not to recognize the variable names. It also does not work to type
> ICC(cbind(unquote(eval))).
> Alternatively, I have tried the cat function, but also here ICC does not
> recognize the input as variable names.
>
> What am I doing wrong? How can I automatically construct the set of
> variable names such that a function recognizes them as variable names?
> ICC is one example, but there are also other computations to be run and
> the set of variables is pretty large, so typing the combinations of
> variable names manually is really unattractive.
>
> What am I missing? It seems to me that there probably is a very simple
> solution in R, but which?
>
> Thank you,
> Peter Verbeet
>
>
> [[alternative HTML version deleted]]
>
> ______________________________________________
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> PLEASE do read the posting guide
> http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.
>
--
_____________________________
Baptiste Auguié
School of Physics
University of Exeter
Stocker Road,
Exeter, Devon,
EX4 4QL, UK
http://newton.ex.ac.uk/research/emag
______________________________
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