> chromosomes id refseq name length 1 0 NC_000001.9 Homo sapiens chromosome 1 247249719 2 1 NC_000002.10 Homo sapiens chromosome 2 242951149 3 2 NC_000003.10 Homo sapiens chromosome 3 199501827 4 3 NC_000004.10 Homo sapiens chromosome 4 191273063 5 4 NC_000005.8 Homo sapiens chromosome 5 180857866 6 5 NC_000006.10 Homo sapiens chromosome 6 170899992 7 6 NC_000007.12 Homo sapiens chromosome 7 158821424 8 7 NC_000008.9 Homo sapiens chromosome 8 146274826 9 8 NC_000009.10 Homo sapiens chromosome 9 140273252 10 9 NC_000010.9 Homo sapiens chromosome 10 135374737 11 10 NC_000011.8 Homo sapiens chromosome 11 134452384 12 11 NC_000012.10 Homo sapiens chromosome 12 132349534 13 12 NC_000013.9 Homo sapiens chromosome 13 114142980 14 13 NC_000014.7 Homo sapiens chromosome 14 106368585 15 14 NC_000015.8 Homo sapiens chromosome 15 100338915 16 15 NC_000016.8 Homo sapiens chromosome 16 88827254 17 16 NC_000017.9 Homo sapiens chromosome 17 78774742 18 17 NC_000018.8 Homo sapiens chromosome 18 76117153 19 18 NC_000019.8 Homo sapiens chromosome 19 63811651 20 19 NC_000020.9 Homo sapiens chromosome 20 62435964 21 20 NC_000021.7 Homo sapiens chromosome 21 46944323 22 21 NC_000022.9 Homo sapiens chromosome 22 49691432 23 22 NC_001807.4 Homo sapiens mitochondrion 16571 24 23 NC_000023.9 Homo sapiens chromosome X 154913754 25 24 NC_000024.8 Homo sapiens chromosome Y 57772954 > xyplot(hits~bin|chromosomes$name[Chromosome+1],data=hits,horizontal=FALSE,origin=0,lab=c(3,10),pch=20,cex=0.01,layout=c(1,5,5),strip=strip.custom(style=3,bg="grey90",par.strip.text=list(cex=0.5)),as.table=TRUE)
I am wondering how to reorder the panels such that they are plotted in the order of chromosomes$id rather than chromosomes$name. I am sure that this has been answered in the past, but I am finding it difficult to understand (I have looked at factor and reorder.factor). (I've had a look at strip.custom to see if I can get what I want with that, and it looks like I should be able to, but I can't figure out how). thanks Dan ______________________________________________ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.