i have 2 groups i want to compare: group A and group B each group contains let's say 20 patients i want to perform a Fisher Exact test on genotype distribution so, see if there is a sign diff in genotpe frequency/distribution (#AA, #AB, #BB) between group A and B not for 1, but for 1000 different genes
my question: how should i build my table so i can do: test <- read.table("table1.txt") fisher.test(test) i know a lot is still missing in the syntax, but i do not know what. any help would be soo much appreciated!! -- View this message in context: http://r.789695.n4.nabble.com/read-table-for-Fisher-Exact-tp2196762p2196762.html Sent from the R help mailing list archive at Nabble.com. ______________________________________________ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.