Even without a namespace one could explicitly reference the label in xtable via:
xtable.label <- get("label", "package:xtable") On 5/16/05, Liaw, Andy <[EMAIL PROTECTED]> wrote: > One possible solution without renaming the functions is to add namespace to > either xtable or Hmisc. Given the size of Hmisc, it probably would be much > easier to do that with xtable. > > With namespace in xtable, you can do xtable:::label() to refer to the > label() in xtable specifically. > > Andy > > > From: Of Sander Oom > > > > Dear David, > > > > I would like to use summarize(Hmisc) and print.xtable(xtable) in a > > single Sweave document, but a conflict with the 'label' function > > prohibits this at the moment! > > > > Would you be able to correct the conflicting code? I will gladly test > > the new package! > > > > I have tried latex(Hmisc) to export the anova table, but > > results are not > > promising! I prefer xtable!! > > > > Thanks, > > > > Sander. > > > > Frank E Harrell Jr wrote: > > > Sander Oom wrote: > > >> Dear Frank, > > >> > > >> I have a Sweave document in which I export anova (aov) > > tables to Latex > > >> and calculate some summary statistics with summarize{Hmisc} for a > > >> graph (as in the example below). > > >> > > >> I currently use the following code for the aov tables: > > >> <<results=tex>>= > > >> tmp <- datGrassHC[datGrassHC$Loc > 0 & datGrassHC$Loc < 9 ,] > > >> tmpAov <- aov(Height~Geology*Altitude*Origin*BinInOut , data=tmp) > > >> tmpTable <- xtable (tmpAov , > > >> caption="ANOVA table for vegetation height.", > > >> label="tab:AnovaHeight" > > >> ) > > >> print.xtable(tmpTable, type="latex", floating=TRUE, > > >> table.placement="ht", caption.placement="top", > > >> latex.environments=c("center")) > > >> ) > > >> @ > > >> > > >> I used xtables, because it has a working aov example. I > > would be happy > > >> to use an alternative if I knew how! Would you have sample code to > > >> illustrate how to export an aov table to Latex using latex{Hmisc}. > > >> > > >> Thanks very much for your help, > > >> > > >> Sander. > > >> > > >> Frank E Harrell Jr wrote: > > >> > > >>> Sander Oom wrote: > > >>> > > >>>> Dear R users, > > >>>> > > >>>> The Sweave code below runs fine, as it is. However, an > > error occurs > > >>>> when the line 'library(xtable)' is uncommented: > > >>>> Error: chunk 1 > > >>>> Error in "label<-"(`*tmp*`, value = "month") : > > >>>> no applicable method for "label<-" > > >>>> > > >>>> Is anybody aware of this and knows a workaround? > > >>>> > > >>>> Thanks, > > >>>> > > >>>> Sander. > > >>>> > > >>>> ******************* > > >>>> > > >>>> \documentclass[a4paper]{article} > > >>>> \title{Sweave Test for summarize} > > >>>> \author{Sander Oom} > > >>>> > > >>>> \usepackage{a4wide} > > >>>> > > >>>> \begin{document} > > >>>> > > >>>> \maketitle > > >>>> > > >>>> \begin{figure}[ht] > > >>>> \begin{center} > > >>>> <<fig=TRUE,echo=FALSE>>= > > >>>> # library(xtable) > > >>>> library(Hmisc) > > >>>> set.seed(111) > > >>>> dfr <- expand.grid(month=1:12, year=c(1997,1998), reps=1:100) > > >>>> month <- dfr$month > > >>>> year <- dfr$year > > >>>> y <- abs(month-6.5) + 2*runif(length(month)) + year-1997 > > >>>> s <- summarize(y, llist(month,year), smedian.hilow, > > conf.int=.5) > > >>>> print(xYplot(Cbind(y,Lower,Upper) ~ month, groups=year, data=s, > > >>>> keys='lines', method='alt', type='b')) > > >>>> @ > > >>>> \end{center} > > >>>> \end{figure} > > >>>> > > >>>> \end{document} > > >>>> > > >>>> ************************ > > >>>> > > >>>> > > >>>> > > >>>> > version > > >>>> _ > > >>>> platform i686-pc-linux-gnu > > >>>> arch i686 > > >>>> os linux-gnu > > >>>> system i686, linux-gnu > > >>>> status > > >>>> major 2 > > >>>> minor 1.0 > > >>>> year 2005 > > >>>> month 04 > > >>>> day 18 > > >>>> language R > > >>>> > > >>>> > > >>> > > >>> I feel this is an xtable problem because Hmisc has being > > using label > > >>> and label<- since 1991. > > >>> > > >>> Frank > > >>> > > >> > > > > > > There are ways to make functions from one area override those from > > > another, but the real solution is to ask the xtable author > > not to have > > > functions that conflict with the (older) Hmisc package. -Frank > > > > > > > -- > > -------------------------------------------- > > Dr Sander P. Oom > > Animal, Plant and Environmental Sciences, > > University of the Witwatersrand > > Private Bag 3, Wits 2050, South Africa > > Tel (work) +27 (0)11 717 64 04 > > Tel (home) +27 (0)18 297 44 51 > > Fax +27 (0)18 299 24 64 > > Email [EMAIL PROTECTED] > > Web www.oomvanlieshout.net/sander > > > > ______________________________________________ > > R-help@stat.math.ethz.ch mailing list > > https://stat.ethz.ch/mailman/listinfo/r-help > > PLEASE do read the posting guide! > > http://www.R-project.org/posting-guide.html > > > > > > > > ______________________________________________ > R-help@stat.math.ethz.ch mailing list > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html > ______________________________________________ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html