On 8/31/2006 10:40 PM, Kimpel, Mark William wrote: > I installed GSView and the file opens correctly and the output is as is > should be. As you suggest, this must be a bug in Adobe CS2 Illustrator > and Photoshop.
It could conceivably still be our bug, but I'd like to hear what Adobe tech support says about it. Duncan Murdoch > > Thanks for your help. > > Mark > > Mark W. Kimpel MD > > > > (317) 490-5129 Work, & Mobile > > > > (317) 663-0513 Home (no voice mail please) > > 1-(317)-536-2730 FAX > > > -----Original Message----- > From: Duncan Murdoch [mailto:[EMAIL PROTECTED] > Sent: Thursday, August 31, 2006 4:27 PM > To: Kimpel, Mark William > Cc: [EMAIL PROTECTED]; r-help@stat.math.ethz.ch > Subject: Re: [R] problem with postscript output of R-devel on Windows > > On 8/31/2006 3:51 PM, Kimpel, Mark William wrote: >> I apologize for my previous confusing example. Below is some sample >> code, taken directly from the "image" help file, that reproduces a >> postscript problem. This now happens with both R 2.3.1 and R 2.4 >> >> What I get appears to be output of only certain postscript "objects", > to >> use an Adobe term. When I use the R GUI menu to "save as", jpeg and > pdf >> files save correctly, but the postscript file does not. I am not > getting >> any axis labels or topo labels. This is true whether I import the PS >> file into either Photoshop or Illustrator. > > I don't see a problem using GSView. Maybe this is an Adobe bug? > > Duncan > >> Thanks, Mark >> >> x <- 10*(1:nrow(volcano)) >> y <- 10*(1:ncol(volcano)) >> image(x, y, volcano, col = terrain.colors(100), axes = FALSE) >> contour(x, y, volcano, levels = seq(90, 200, by = 5), >> add = TRUE, col = "peru") >> axis(1, at = seq(100, 800, by = 100)) >> axis(2, at = seq(100, 600, by = 100)) >> box() >> title(main = "Maunga Whau Volcano", font.main = 4) >> >>> sessionInfo() >> Version 2.3.1 (2006-06-01) >> i386-pc-mingw32 >> >> attached base packages: >> [1] "methods" "stats" "graphics" "grDevices" "utils" >> "datasets" >> [7] "base" >> >> Mark W. Kimpel MD >> >> >> >> (317) 490-5129 Work, & Mobile >> >> >> >> (317) 663-0513 Home (no voice mail please) >> >> 1-(317)-536-2730 FAX >> >> >> -----Original Message----- >> From: Duncan Murdoch [mailto:[EMAIL PROTECTED] >> Sent: Thursday, August 31, 2006 12:52 PM >> To: Kimpel, Mark William >> Cc: r-help@stat.math.ethz.ch >> Subject: Re: [R] problem with postscript output of R-devel on Windows >> >> On 8/31/2006 11:27 AM, Kimpel, Mark William wrote: >>> I have developed a problem with the postscript output of plot on >> Windows. My code still works properly with R 2.3 but, with R 2.4, the >> white text on red background does not show up. It does, however, show > up >> when output is sent to the screen. Below is my code and sessionInfo. >>> R version 2.4.0 Under development (unstable) (2006-08-29 r39012) >>> i386-pc-mingw32 >>> >>> locale: >>> LC_COLLATE=English_United States.1252;LC_CTYPE=English_United >> States.1252;LC_MONETARY=English_United >> States.1252;LC_NUMERIC=C;LC_TIME=English_United States.1252 >>> attached base packages: >>> [1] "splines" "tools" "methods" "stats" "graphics" >> "grDevices" "utils" "datasets" >>> [9] "base" >>> >>> other attached packages: >>> Rgraphviz geneplotter XML GOstats Category >> hgu95av2 KEGG multtest xtable >>> "1.11.9" "1.11.8" "0.99-8" "1.6.0" "1.4.1" >> "1.12.0" "1.8.1" "1.11.2" "1.3-2" >>> RBGL annotate GO graph Ruuid >> limma genefilter survival rat2302 >>> "1.8.1" "1.11.5" "1.6.5" "1.11.13" "1.11.2" >> "2.7.9" "1.11.8" "2.28" "1.12.0" >>> affy affyio Biobase >>> "1.11.6" "1.1.8" "1.11.29" >>> >>> >>> fileName<-paste(experiment, contrast, "FDR", FDR, "Graph", "ps", >> sep=".") >>> postscript(file=fileName, paper="special",width=width, >> height=height) #set up graphics device >>> plot(result.gN, layout.param, nodeAttrs = nAttrs, edgeAttrs = >> eAttrs, >>> main=paste(paste("Experiment:", experiment, "; Contrast:", >> contrast,"; FDR:", FDR, sep=""), paste("Min. connections ==", >> min.edges, "Min. citations per connection ==", min.cites, "Additional >> search criteria:", >>> termAdditional, sep=" "), sep=" ")) >> >> Could you put together a reproducible example to illustrate the > problem? >> We don't have all the variables used in that example. I think you >> should be able to do it with just base packages attached; if not, it's > >> likely a problem with one of the contributed packages, rather than > with >> R. >> >> Duncan Murdoch >> >> ______________________________________________ >> R-help@stat.math.ethz.ch mailing list >> https://stat.ethz.ch/mailman/listinfo/r-help >> PLEASE do read the posting guide > http://www.R-project.org/posting-guide.html >> and provide commented, minimal, self-contained, reproducible code. > > ______________________________________________ > R-help@stat.math.ethz.ch mailing list > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code. ______________________________________________ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.