Hi Seth
I'm running R on WinXP. On the first time I've installed Rdbi and RdbiPgSQL
from zip files not downloaded from Bioconductor. No problems during
installation.
Now I tried to install from biocLite and a message was showed for RdbiPgSQL.
> biocLite(c("Rdbi", "RdbiPgSQL"))
Running getBioC version 0.1.8 with R version 2.4.1
Running biocinstall version 1.9.9 with R version 2.4.1
Your version of R requires version 1.9 of Bioconductor.
Dependency ''RdbiPgSQL'' is not available
...
I gave a look at Bioconductor site, where I saw an Error report during
checking of BioC 1.9/RdbiPgSQL for Windows Server 2003. The same was
reported for another BioC releases.
Conclusion: Isn't possible access postgreSQL databases from R?
Thanks
-----Mensagem original-----
De: Seth Falcon [mailto:[EMAIL PROTECTED]
Enviada em: segunda-feira, 5 de fevereiro de 2007 15:07
Para: Eduardo Dutra de Armas
Cc: r-help@stat.math.ethz.ch
Assunto: Re: [R] RdbiPgSQL in R 2.4.1
Hi Eduardo,
It would probably be best to send question regarding Bioconductor
packages to the bioconductor email list.
"Eduardo Dutra de Armas" <[EMAIL PROTECTED]> writes:
> Hi R-users
>
> I recently downloaded RdbiPgSQL 1.8.0 and Rdbi 1.8.0 from Bioconductor to
be
> installed under R 2.4.1.
>
> When requiring RdbiPgSQL an error message is showed as follows:
>
>
>
>> require(RdbiPgSQL)
>
> Loading required package: RdbiPgSQL
>
> Error in library(package, lib.loc = lib.loc, character.only = TRUE,
logical
> = TRUE, :
>
> RdbiPgSQL is not a valid package installed < 2.0.0?
>
>
>
> There is no issue about version restriction in Description file.
What OS are you running on? How did you install the packages? I'm
not able to reproduce the message you posted.
Perhaps try reinstalling using the biocLite install script. Like
this:
source("http://bioconductor.org/biocLite.R";)
biocLite(c("Rdbi", "RdbiPgSQL))
NB: normally, you don't need to specify dependencies, but this way it
will reinstall Rdbi as well in case you have a bogus install...
+ seth
--
No virus found in this incoming message.
14:04
--
16:48
______________________________________________
R-help@stat.math.ethz.ch mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
