I tried biomaRt library(biomaRt) ensnp = useMart("snp", dataset = "hsapiens_snp") snp = getSNP(chromosome = 17, start = 73649033, end = 73679033, mart = ensnp) show(snp)
Gave me a nice table but it did not seem to permit starting from the point of knowing the SNP and entering a list of rs######. I guess I could always fudge around. But it does not provide the one-stop I was looking for. > you might look at the biomaRt package in Bioconductor and see if its snp > query resolution > facilities meet your needs. ______________________________________________ R-help@stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.