Dear all,
I have been successful so far in plotting matrices and getting the regression
line. But, as the matrices contains values like 1 and 0 (diagonal line) which
is actually not needed as they are for the same gene, is creating bias in my
regression line. I wish to neglect that part of the matrix and read the rest
and plot the matrices again.
I am attaching two matrices here for your reference.
Can anyone please help me regarding that.
Thanks very much.
Urmi
---------------------------------
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0.007382 0.49239 -0.083894 0.383229 0.122648
-0.133041 0.378121 -0.064975 0.475417 -0.156476
-0.080742
-0.012096 1 -0.105556 0.113937 -0.092952
0.174718 0.08174 0.064185 -0.004801 0.118615
0.073362 0.025144 -0.051149 0.005549 0.144066
-0.045014
-0.100857 -0.105556 1 0.048302 -0.065759
-0.021766 -0.089656 -0.026402 -0.187463 0.115297
-0.094202 -0.179138 -0.036165 -0.106557 -0.087692
0.675215
-0.069916 0.113937 0.048302 1 0.025407
0.016662 0.009761 0.302218 -0.15783 0.004884
-0.0539 0.06716 0.078652 -0.047702 -0.000423 -0.037833
-0.097162 -0.092952 -0.065759 0.025407 1
-0.018238 -0.087263 0.021593 -0.078723 -0.110616
0.127107 -0.02927 -0.094423 -0.048349 0.019307
-0.05013
0.007382 0.174718 -0.021766 0.016662 -0.018238
1 -0.01282 -0.015617 0.084991 -0.061002
-0.017901 -0.02836 -0.023457 0.002727 0.675366
-0.016839
0.49239 0.08174 -0.089656 0.009761 -0.087263 -0.01282
1 0.103351 0.545116 0.137995 -0.120075
0.335196 -0.036118 0.454495 -0.186613 -0.069724
-0.083894 0.064185 -0.026402 0.302218 0.021593
-0.015617 0.103351 1 -0.082256 0.022675
0.029452 0.010494 -0.039677 -0.04907 -0.019435
-0.035206
0.383229 -0.004801 -0.187463 -0.15783 -0.078723
0.084991 0.545116 -0.082256 1 0.087963
0.212369 0.413117 -0.03035 0.576147 0.169672
-0.140684
0.122648 0.118615 0.115297 0.004884 -0.110616
-0.061002 0.137995 0.022675 0.087963 1
0.066721 0.100693 -0.105733 0.054071 -0.080891
-0.123128
-0.133041 0.073362 -0.094202 -0.0539 0.127107
-0.017901 -0.120075 0.029452 0.212369 0.066721
1 0.19798 -0.097407 -0.115526 0.167922 -0.058937
0.378121 0.025144 -0.179138 0.06716 -0.02927
-0.02836 0.335196 0.010494 0.413117 0.100693
0.19798 1 -0.105542 0.224735 0.079891 -0.165202
-0.064975 -0.051149 -0.036165 0.078652 -0.094423
-0.023457 -0.036118 -0.039677 -0.03035 -0.105733
-0.097407 -0.105542 1 -0.062121 -0.062172
-0.023992
0.475417 0.005549 -0.106557 -0.047702 -0.048349
0.002727 0.454495 -0.04907 0.576147 0.054071
-0.115526 0.224735 -0.062121 1 -0.025131
-0.086425
-0.156476 0.144066 -0.087692 -0.000423 0.019307
0.675366 -0.186613 -0.019435 0.169672 -0.080891
0.167922 0.079891 -0.062172 -0.025131 1
-0.075676
-0.080742 -0.045014 0.675215 -0.037833 -0.05013
-0.016839 -0.069724 -0.035206 -0.140684 -0.123128
-0.058937 -0.165202 -0.023992 -0.086425 -0.075676
1
0 1.701634 1.732966 1.638478 1.804548
1.679982 1.808682 1.907909 1.782082 1.820282
1.393257 1.568896 2.014273 1.40849 1.730805 1.645146
1.701634 0 1.166662 1.072174 1.238244
1.113678 1.58344 1.682667 1.55684 1.59504 1.423253
1.961898 2.407275 1.801492 2.123807 2.038148
1.732966 1.166662 0 0.548174 0.977588
0.853022 1.614772 1.713999 1.588172 1.626372
1.454585 1.99323 2.438607 1.832824 2.155139 2.06948
1.638478 1.072174 0.548174 0 0.8831 0.758534
1.520284 1.619511 1.493684 1.531884 1.360097
1.898742 2.344119 1.738336 2.060651 1.974992
1.804548 1.238244 0.977588 0.8831 0 0.728972
1.686354 1.785581 1.659754 1.697954 1.526167
2.064812 2.510189 1.904406 2.226721 2.141062
1.679982 1.113678 0.853022 0.758534 0.728972
0 1.561788 1.661015 1.535188 1.573388
1.401601 1.940246 2.385623 1.77984 2.102155 2.016496
1.808682 1.58344 1.614772 1.520284 1.686354
1.561788 0 0.477421 1.199876 1.238076
1.530301 2.068946 2.514323 1.90854 2.230855 2.145196
1.907909 1.682667 1.713999 1.619511 1.785581
1.661015 0.477421 0 1.299103 1.337303
1.629528 2.168173 2.61355 2.007767 2.330082 2.244423
1.782082 1.55684 1.588172 1.493684 1.659754
1.535188 1.199876 1.299103 0 0.823034
1.503701 2.042346 2.487723 1.88194 2.204255 2.118596
1.820282 1.59504 1.626372 1.531884 1.697954
1.573388 1.238076 1.337303 0.823034 0
1.541901 2.080546 2.525923 1.92014 2.242455 2.156796
1.393257 1.423253 1.454585 1.360097 1.526167
1.401601 1.530301 1.629528 1.503701 1.541901
0 1.653521 2.098898 1.493115 1.81543 1.729771
1.568896 1.961898 1.99323 1.898742 2.064812
1.940246 2.068946 2.168173 2.042346 2.080546
1.653521 0 0.988747 1.51847 1.840785 1.755126
2.014273 2.407275 2.438607 2.344119 2.510189
2.385623 2.514323 2.61355 2.487723 2.525923
2.098898 0.988747 0 1.963847 2.286162 2.200503
1.40849 1.801492 1.832824 1.738336 1.904406 1.77984
1.90854 2.007767 1.88194 1.92014 1.493115 1.51847 1.963847
0 1.054405 0.968746
1.730805 2.123807 2.155139 2.060651 2.226721
2.102155 2.230855 2.330082 2.204255 2.242455
1.81543 1.840785 2.286162 1.054405 0 0.722953
1.645146 2.038148 2.06948 1.974992 2.141062
2.016496 2.145196 2.244423 2.118596 2.156796
1.729771 1.755126 2.200503 0.968746 0.722953 0
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