Peter, I ran into similar problems with using valgrind to check my package BAS
From my understanding using valgrind with rhub does not run the same checks as R -d "valgrind --tool=memcheck --leak-check=full" --vanilla < mypkg-Ex.R see https://github.com/r-hub/rhub/issues/23 which might explain why it will run without errors there but the CRAN check will flag errors/warnings. (perhaps someone else can confirm) best, Merlise Merlise A Clyde Professor & Chair Department of Statistical Science Duke University http://stat.duke.edu/~clyde [email protected]<mailto:[email protected]> 919 681 8440 On Nov 5, 2017, at 7:05 PM, Peter Dunn <[email protected]<mailto:[email protected]>> wrote: “unless I am being really stupid” Lucky for that caveat. Feeling rather stupid for this late effort. Thanks so much. Help greatly appreciated. P. On 6/Nov/17, 9:51 am, "Iñaki Úcar" <[email protected]<mailto:[email protected]>> wrote: 2017-11-06 0:09 GMT+01:00 Peter Dunn <[email protected]<mailto:[email protected]>>: Impossible or not… it just happened (unless I am being really stupid, which is entirely possible, indeed probable). I confirmed again this morning: After rebuilding (R CMD build) and checking (R CMD check) without any errors, I used rhub and the command line again: Running valgrind at the command line, I get this error: ==5097== Conditional jump or move depends on uninitialised value(s) ==5097== at 0x1118F61FB: smallp_ (in /Users/pdunn2/Library/R/3.4/library/tweedie/libs/tweedie.so) What I meant is that, if you run the script in tweedie.Rcheck from the command line, Rscript uses your *installed* version of tweedie, not the tarball you built with R CMD build. So if you didn't run R CMD INSTALL, Rscript is running an old version without any fix, hence the disagreement with R CMD check. Iñaki USC, Locked Bag 4, Maroochydore DC, Queensland, 4558 Australia. CRICOS Provider No: 01595D Please consider the environment before printing this email. This email is confidential. If received in error, please delete it from your system. [[alternative HTML version deleted]] ______________________________________________ [email protected]<mailto:[email protected]> mailing list https://urldefense.proofpoint.com/v2/url?u=https-3A__stat.ethz.ch_mailman_listinfo_r-2Dpackage-2Ddevel&d=DwIGaQ&c=imBPVzF25OnBgGmVOlcsiEgHoG1i6YHLR0Sj_gZ4adc&r=NOkxkvdFOOffXzeTY2kgZQ&m=wQM2pJJEon1zRq8pImHXAnjSO5MT728HIQf-oNWJfAo&s=VTJwkGdmvI9lNBVHxBc_38mQ16_pBYZ3dLnKdZBvBwg&e= [[alternative HTML version deleted]] ______________________________________________ [email protected] mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel
