On Tue, 14 May 2019 at 12:08, Christian Peikert <christian.peik...@t-online.de> wrote: > > Dear all, > I have tried to upload my R-package to CRAN but this package was sadly > reject due to a Warning and a Note. I already know this warning/note but > I could find out to solve this. > > * checking data for ASCII and uncompressed saves ... WARNING > Warning: large data files saved inefficiently: > size ASCII compress > cellr_morgenstern_et_al_2017.rda 544Kb TRUE xz > mcp_reimann_et_al_2017.rda 154Kb TRUE xz > > These two data frames are required example datasets. I have used the > following save function: > > save(cellr_morgenstern_et_al_2017, > file="cellr_morgenstern_et_al_2017.rda",compress='xz', > compression_level=9 ,ascii = TRUE) > save(mcp_reimann_et_al_2017, > file="mcp_reimann_et_al_2017.rda",compress='xz', compression_level=9 > ,ascii = TRUE)
Try tools::resaveRdaFiles instead. > * checking R code for possible problems ... [40s] NOTE > runExample03: no visible global function definition for 'shinyClustPro' > > shinyApp is a function defined in a source R file which is loaded by the > source function. Because this is an example function, it should not be a > “visible” function in the package. > > appDir <- system.file("shiny-examples", "03", package = "clustpro") > moduleDir <- system.file("shiny_module", package = "clustpro") > source(file.path(moduleDir,"module_shiny_clustpro.R")) > …. > ….. > shinyClustPro(df_proteomics, data_columns = data_columns, info_columns = > info_columns) You can add a simple shinyClustPro <- NULL before sourcing the file (and therefore, that variable is rewritten). If showing that line annoys you, put it inside a \dontshow{} block (but not sure if this could raise another NOTE). Iñaki ______________________________________________ R-package-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel