"R CMD build bssm" on a Windows 10 machine ends by complaining, " incomplete final line found on 'growth_model.log'". This problem was not fixed by adding a couple of blank lines to 'growth_model.Rmd'.
Suggestions? Thanks, Spencer Graves p.s. The same command worked fine on a Windows 7 computer. The "bssm" package used here was cloned from ""https://github.com/sbgraves237/bssm": This is not identical to helski/bssm, but close. *EXCERPT FROM CMD: * ... * creating vignettes ... ERROR --- re-building 'bssm.Rmd' using rmarkdown [WARNING] Note with key '1' defined at line 318 column 1 but not used. --- finished re-building 'bssm.Rmd' --- re-building 'growth_model.Rmd' using rmarkdown Warning in readLines(log) : incomplete final line found on 'growth_model.log' Error: processing vignette 'growth_model.Rmd' failed with diagnostics: Failed to compile growth_model.tex. See https://yihui.name/tinytex/r/#debugging for debugging tips. --- failed re-building 'growth_model.Rmd' SUMMARY: processing the following file failed: 'growth_model.Rmd' Error: Vignette re-building failed. Execution halted *PLFLATEX.LOG *2019-09-19 08:11:08,435-0500 INFO pdflatex - starting with command line: C:\PROGRA~1\MIKTEX~1.9\miktex\bin\x64\pdflatex.exe -halt-on-error -interaction=batchmode bssm.tex 2019-09-19 08:11:08,435-0500 WARN pdflatex - running with administrator privileges 2019-09-19 08:11:08,450-0500 INFO pdflatex - running 'initexmf' to refresh the file name database 2019-09-19 08:11:13,734-0500 INFO pdflatex - running 'initexmf' to create font map files 2019-09-19 08:11:22,735-0500 INFO pdflatex - allowing known shell commands 2019-09-19 08:11:22,735-0500 INFO pdflatex - enabling input (output) from (to) processes 2019-09-19 08:11:22,798-0500 INFO pdflatex - going to create file: pdflatex.fmt 2019-09-19 08:11:31,033-0500 FATAL pdflatex - GUI framework cannot be initialized. 2019-09-19 08:11:31,033-0500 FATAL pdflatex - Info: 2019-09-19 08:11:31,033-0500 FATAL pdflatex - Source: Libraries\MiKTeX\UI\Qt\mikuiqt.cpp 2019-09-19 08:11:31,033-0500 FATAL pdflatex - Line: 77 2019-09-19 08:11:31,033-0500 INFO pdflatex - finishing with exit code 1 2019-09-19 08:12:53,079-0500 INFO pdflatex - starting with command line: C:\PROGRA~1\MIKTEX~1.9\miktex\bin\x64\pdflatex.exe -halt-on-error -interaction=batchmode growth_model.tex 2019-09-19 08:12:53,079-0500 WARN pdflatex - running with administrator privileges 2019-09-19 08:12:53,079-0500 INFO pdflatex - allowing known shell commands 2019-09-19 08:12:53,079-0500 INFO pdflatex - enabling input (output) from (to) processes 2019-09-19 08:12:53,392-0500 FATAL pdflatex - GUI framework cannot be initialized. 2019-09-19 08:12:53,392-0500 FATAL pdflatex - Info: 2019-09-19 08:12:53,392-0500 FATAL pdflatex - Source: Libraries\MiKTeX\UI\Qt\mikuiqt.cpp 2019-09-19 08:12:53,392-0500 FATAL pdflatex - Line: 77 2019-09-19 08:12:53,392-0500 INFO pdflatex - finishing with exit code 1 2019-09-19 13:15:45,812-0500 INFO pdflatex - starting with command line: C:\PROGRA~1\MIKTEX~1.9\miktex\bin\x64\pdflatex.exe -halt-on-error -interaction=batchmode growth_model.tex 2019-09-19 13:15:45,815-0500 WARN pdflatex - running with administrator privileges 2019-09-19 13:15:45,819-0500 INFO pdflatex - allowing known shell commands 2019-09-19 13:15:45,819-0500 INFO pdflatex - enabling input (output) from (to) processes 2019-09-19 13:15:46,231-0500 FATAL pdflatex - GUI framework cannot be initialized. 2019-09-19 13:15:46,231-0500 FATAL pdflatex - Info: 2019-09-19 13:15:46,231-0500 FATAL pdflatex - Source: Libraries\MiKTeX\UI\Qt\mikuiqt.cpp 2019-09-19 13:15:46,231-0500 FATAL pdflatex - Line: 77 2019-09-19 13:15:46,231-0500 INFO pdflatex - finishing with exit code 1 2019-09-19 13:22:55,302-0500 INFO pdflatex - starting with command line: C:\PROGRA~1\MIKTEX~1.9\miktex\bin\x64\pdflatex.exe -halt-on-error -interaction=batchmode growth_model.tex 2019-09-19 13:22:55,302-0500 WARN pdflatex - running with administrator privileges 2019-09-19 13:22:55,302-0500 INFO pdflatex - allowing known shell commands 2019-09-19 13:22:55,302-0500 INFO pdflatex - enabling input (output) from (to) processes 2019-09-19 13:22:55,640-0500 FATAL pdflatex - GUI framework cannot be initialized. 2019-09-19 13:22:55,640-0500 FATAL pdflatex - Info: 2019-09-19 13:22:55,640-0500 FATAL pdflatex - Source: Libraries\MiKTeX\UI\Qt\mikuiqt.cpp 2019-09-19 13:22:55,640-0500 FATAL pdflatex - Line: 77 2019-09-19 13:22:55,641-0500 INFO pdflatex - finishing with exit code 1 2019-09-19 13:22:56,136-0500 INFO pdflatex - starting with command line: C:\PROGRA~1\MIKTEX~1.9\miktex\bin\x64\pdflatex.exe -halt-on-error -interaction=batchmode growth_model.tex 2019-09-19 13:22:56,139-0500 WARN pdflatex - running with administrator privileges 2019-09-19 13:22:56,154-0500 INFO pdflatex - allowing known shell commands 2019-09-19 13:22:56,155-0500 INFO pdflatex - enabling input (output) from (to) processes 2019-09-19 13:22:56,434-0500 FATAL pdflatex - GUI framework cannot be initialized. 2019-09-19 13:22:56,435-0500 FATAL pdflatex - Info: 2019-09-19 13:22:56,435-0500 FATAL pdflatex - Source: Libraries\MiKTeX\UI\Qt\mikuiqt.cpp 2019-09-19 13:22:56,435-0500 FATAL pdflatex - Line: 77 2019-09-19 13:22:56,435-0500 INFO pdflatex - finishing with exit code 1 2019-09-19 13:26:01,857-0500 INFO pdflatex - starting with command line: C:\PROGRA~1\MIKTEX~1.9\miktex\bin\x64\pdflatex.exe -halt-on-error -interaction=batchmode growth_model.tex 2019-09-19 13:26:01,873-0500 WARN pdflatex - running with administrator privileges 2019-09-19 13:26:01,873-0500 INFO pdflatex - allowing known shell commands 2019-09-19 13:26:01,873-0500 INFO pdflatex - enabling input (output) from (to) processes 2019-09-19 13:26:02,188-0500 FATAL pdflatex - GUI framework cannot be initialized. 2019-09-19 13:26:02,188-0500 FATAL pdflatex - Info: 2019-09-19 13:26:02,188-0500 FATAL pdflatex - Source: Libraries\MiKTeX\UI\Qt\mikuiqt.cpp 2019-09-19 13:26:02,188-0500 FATAL pdflatex - Line: 77 2019-09-19 13:26:02,188-0500 INFO pdflatex - finishing with exit code 1 *> **sessionInfo() in the Terminal *R version 3.6.1 (2019-07-05) Platform: x86_64-w64-mingw32/x64 (64-bit) Running under: Windows 10 x64 (build 18362) Matrix products: default locale: [1] LC_COLLATE=English_United States.1252 [2] LC_CTYPE=English_United States.1252 [3] LC_MONETARY=English_United States.1252 [4] LC_NUMERIC=C [5] LC_TIME=English_United States.1252 attached base packages: [1] stats graphics grDevices utils datasets methods base loaded via a namespace (and not attached): [1] compiler_3.6.1 ** [[alternative HTML version deleted]] ______________________________________________ R-package-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel