Hi, What is the recommended way to test for those issues locally? If it is tested during cran submission, then seems reasonable to be enabled just by --as-cran switch. Is it? Thanks
On Wed 17 Jun, 2020, 12:32 AM Wayne Oldford, <rwoldf...@uwaterloo.ca> wrote: > Thank you! > > -----Original Message----- > From: Gábor Csárdi <csardi.ga...@gmail.com> > Date: Tuesday, June 16, 2020 at 4:32 PM > To: Wayne Oldford <rwoldf...@uwaterloo.ca> > Cc: List r-package-devel <r-package-devel@r-project.org> > Subject: Re: [R-pkg-devel] check cross-references error: Non-file > package-anchored link(s) > > This is how to look up the filename. The first "sp" is the topic name, > the second is the package name. > > > help("sp", "sp")[[1]] > [1] "C:/Users/csard/R/win-library/4.0/sp/help/00sp" > > So you need to link to the "00sp.Rd" file: \link[sp:00sp]{sp} > > Gabor > > On Tue, Jun 16, 2020 at 9:09 PM Wayne Oldford <rwoldf...@uwaterloo.ca> > wrote: > > > > Hi > > > > I got caught by this new test this week in trying to push an updated > release of the loon package to CRAN. > > > > By following this thread, I corrected my cross-references to > external packages but I got stymied by > > the one I hoped to give to the "sp" package for Spatial data > > > > _________ > > > > Here is the history: > > > > I tried > > \link[sp:sp]{sp} > > which failed here: > > Debian: < > https://win-builder.r-project.org/incoming_pretest/loon_1.3.1_20200616_162128/Debian/00check.log > > > > Status: 1 WARNING > > > > > > That was meant to correct an earlier attempt (it did for other links > to "scales" for example) where I had tried > > \link[sp]{sp} > > and failed here: > > Debian: < > https://win-builder.r-project.org/incoming_pretest/loon_1.3.1_20200615_213749/Debian/00check.log > > > > Status: 1 WARNING > > > > > > So to complete the possibilities as I understand them, I just now > tried > > \link{sp} > > which, as might be expected, failed here: > > Debian: < > https://win-builder.r-project.org/incoming_pretest/loon_1.3.1_20200616_213921/Debian/00check.log > > > > Status: 1 WARNING > > As expected, error here was different: "Missing link" as opposed > to "Non-file package-anchored link" > > > > _________ > > > > > > I am not sure whether I have missed a subtlety in WRE or that the > peculiar circumstance > > where the package, the topic, and the file name are all identical > (sp) is some weird boundary case. > > > > Without further advice, I think I am just going to remove the link > to "sp". > > It really is just a courtesy link to the package description for > "sp". > > > > Thanks in advance for your thoughts. > > > > Wayne > > > > > > > > > > -----Original Message----- > > From: R-package-devel <r-package-devel-boun...@r-project.org> on > behalf of Georgi Boshnakov <georgi.boshna...@manchester.ac.uk> > > Date: Tuesday, June 16, 2020 at 9:27 AM > > To: Gábor Csárdi <csardi.ga...@gmail.com>, Duncan Murdoch < > murdoch.dun...@gmail.com> > > Cc: List r-package-devel <r-package-devel@r-project.org> > > Subject: Re: [R-pkg-devel] check cross-references error: Non-file > package-anchored link(s) > > > > I think that the current behaviour is documented in WRE: > > > > "...There are two other forms of optional argument specified as > \link[pkg]{foo} and > > \link[pkg:bar]{foo} to link to the package pkg, to files > foo.html and bar.html respectively. > > These are rarely needed, perhaps to refer to not-yet-installed > packages (but there the HTML > > help system will resolve the link at run time) or in the > normally undesirable event that more > > than one package offers help on a topic7 (in which case the > present package has precedence so > > this is only needed to refer to other packages). They are > currently only used in HTML help > > (and ignored for hyperlinks in LATEX conversions of help pages), > and link to the file rather > > than the topic (since there is no way to know which topics are > in which files in an uninstalled > > package) ... Because they have been frequently misused, the > HTML help system looks for topic foo in package pkg > > if it does not find file foo.html." > > > > Unless I am missing something, it seems that it would be > relatively painless to reverse the logic of the current behaviour of the > help system, > > i.e. to start looking first for the topic and then for a file. > > > > Georgi Boshnakov > > > > -----Original Message----- > > From: R-package-devel <r-package-devel-boun...@r-project.org> > On Behalf Of Gábor Csárdi > > Sent: 16 June 2020 13:44 > > To: Duncan Murdoch <murdoch.dun...@gmail.com> > > Cc: List r-package-devel <r-package-devel@r-project.org> > > Subject: Re: [R-pkg-devel] check cross-references error: > Non-file package-anchored link(s) > > > > On Mon, Jun 15, 2020 at 5:30 PM Duncan Murdoch < > murdoch.dun...@gmail.com> wrote: > > > > > > On 15/06/2020 12:05 p.m., Martin Maechler wrote: > > > >>>>>> Duncan Murdoch on Sun, 14 Jun 2020 07:28:03 -0400 > writes: > > > > > > > > > I agree with almost everything you wrote, except one > thing: this isn't > > > > > newly enforced, it has been enforced since the help > system began. What > > > > > I think is new is that there are now tests for it. > Previously those > > > > > links just wouldn't work. > > > > > > > > > Duncan Murdoch > > > > > > > > Yes, to all... including Duncan's agreement with Gábor. > > > > > > > > Also, Duncan M earlier did mention that he had wanted to > > > > *change* the link-to-file behavior for these cases (when he > wrote > > > > most of the Rd2html source code) but somehow did not get it. > > > > > > Actually, I don't think I pushed for this change at the time > (or at > > > least I didn't push much). I just wish now that I had, > because I > > > think it will be harder to do it now than it would have been > then. > > > > > > Duncan > > > > I am not entirely sure, but maybe just documenting the current > behaviour and undoing 78674 could work. With some tweaks? E.g. > > > > * updating R-exts to say that \link[pkg:topic]{text} will link > to `topic.html` in `pkg` first (for historical reasons), and falls back to > searching for `topic` in `pkg` at render time. > > * updating Rd2HTML to look for the topic and use it in the link, > instead of throwing a warning, in it cannot find `topic.html` > > * removing the `R CMD check` warning for non-file links, that > was added in 78674 :) > > > > Is there anything else? > > > > Gabor > > > > [...] > > > > ______________________________________________ > > R-package-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-package-devel > > ______________________________________________ > > R-package-devel@r-project.org mailing list > > https://stat.ethz.ch/mailman/listinfo/r-package-devel > > > > > > ______________________________________________ > > R-package-devel@r-project.org mailing list > > https://stat.ethz.ch/mailman/listinfo/r-package-devel > > > ______________________________________________ > R-package-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-package-devel > [[alternative HTML version deleted]] ______________________________________________ R-package-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel