On Wed, Aug 26, 2020 at 7:43 AM Vincent van Hees <vincentvanh...@gmail.com> wrote: > > Addressing the errors is not the problem. I want to be able to detect these > problems when I do: R CMD check --as-cran. > At the moment, I can only detect the errors by submitting the package to > CRAN, because only their package check triggers these errors. > The win-builder system will also detect them.
These checks trigger for me on your package. > R CMD check GGIR_2.1-0.tar.gz --as-cran * using log directory '/home/josh/git/GGIR.Rcheck' * using R version 4.0.2 (2020-06-22) * using platform: x86_64-pc-linux-gnu (64-bit) * using session charset: UTF-8 * using option '--as-cran' * checking for file 'GGIR/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'GGIR' version '2.1-0' * checking CRAN incoming feasibility ... NOTE Maintainer: 'Vincent T van Hees <v.vanh...@accelting.com>' New maintainer: Vincent T van Hees <v.vanh...@accelting.com> Old maintainer(s): Vincent T van Hees <vincentvanh...@gmail.com> Found the following (possibly) invalid URLs: URL: https://cran.r-project.org/web/packages/activityCounts/index.html From: inst/doc/ExternalFunction.html Status: 200 Message: OK CRAN URL not in canonical form URL: https://europepmc.org/article/med/22770768 From: inst/doc/GGIR.html Status: Error Message: libcurl error code 35: error:14094410:SSL routines:ssl3_read_bytes:sslv3 alert handshake failure The canonical URL of the CRAN page for a package is https://CRAN.R-project.org/package=pkgname * checking package namespace information ... OK * checking package dependencies ... OK ... Make sure you have incoming checks enabled, by setting the environment variable _R_CHECK_CRAN_INCOMING_=TRUE. Best, Josh > On Wed, 26 Aug 2020 at 14:30, Bryan Hanson <han...@depauw.edu> wrote: > > > At the minimum you should look at the “moved to” URLs and change your > > links to those (some are outright changes in URLs that were redirected and > > some are http to https changes). > > > > Bryan > > > > > On Aug 26, 2020, at 8:22 AM, Vincent van Hees <vincentvanh...@gmail.com> > > wrote: > > > > > > Hello, > > > URL errors in my DESCRIPTION file and package vignette are not picked up > > > when I do R CMD check --as-cran or devtools::check(). I only know about > > > these errors because CRAN has rejected my package submission and > > instructed > > > me to fix the urls (example at end of this message). > > > > > > I am trying to figure out how I can get R CMD check --as-cran to detect > > > these URL mistakes. From > > > https://cran.r-project.org/web/packages/URL_checks.html I understand > > that I > > > need libcurl installed, which I have. > > > > > > Can anyone tell me whether I am using the wrong combination of libcurl > > > version, R version, and Ubuntu version? (see versions below). If not, > > what > > > else can I do to get the URL checks to work? > > > > > > Thanks, Vincent > > > > > > vincent@vincent-VB:~$ curl-config --version > > > *libcurl 7.58.0* > > > > > > vincent@vincent-VB:~$ curl -V > > > *curl 7.58.0* (x86_64-pc-linux-gnu) libcurl/7.58.0 OpenSSL/1.1.1 > > > zlib/1.2.11 libidn2/2.0.4 libpsl/0.19.1 (+libidn2/2.0.4) nghttp2/1.30.0 > > > librtmp/2.3 > > > Release-Date: 2018-01-24 > > > Protocols: dict file ftp ftps gopher http https imap imaps ldap ldaps > > pop3 > > > pop3s rtmp rtsp smb smbs smtp smtps telnet tftp > > > Features: AsynchDNS IDN IPv6 Largefile GSS-API Kerberos SPNEGO NTLM > > NTLM_WB > > > SSL libz TLS-SRP HTTP2 UnixSockets HTTPS-proxy PSL > > > > > > vincent@vincent-VB:~$ R --version > > > *R version 4.0.2* (2020-06-22) -- "Taking Off Again" > > > Copyright (C) 2020 The R Foundation for Statistical Computing > > > Platform: x86_64-pc-linux-gnu (64-bit) > > > > > > R is free software and comes with ABSOLUTELY NO WARRANTY. > > > You are welcome to redistribute it under the terms of the > > > GNU General Public License versions 2 or 3. > > > For more information about these matters see > > > https://www.gnu.org/licenses/. > > > > > > vincent@vincent-VB:~$ lsb_release -a > > > No LSB modules are available. > > > Distributor ID: Ubuntu > > > Description: *Ubuntu 18.04.5 LTS* > > > Release: 18.04 > > > Codename: bionic > > > > > > Example of most recent URL mistakes in my package detected by CRAN > > package > > > submission process which I could not detect locally: > > > Found the following (possibly) invalid URLs: URL: > > > http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0142533 > > > (moved to > > > > > https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0142533) > > > From: inst/CITATION Status: 200 Message: OK URL: https://geneactiv.org/ > > > (moved to https://www.activinsights.com/) From: inst/doc/GGIR.html > > Status: > > > 200 Message: OK URL: https://www.accelting.com/ (moved to > > > https://accelting.com/) From: inst/doc/GGIR.html Status: 200 Message: OK > > > URL: https://www.physiology.org/doi/10.1152/japplphysiol.00421.2014 > > (moved > > > to https://journals.physiology.org/doi/10.1152/japplphysiol.00421.2014) > > > From: inst/CITATION Status: 200 Message: OK > > > > > > [[alternative HTML version deleted]] > > > > > > ______________________________________________ > > > R-package-devel@r-project.org mailing list > > > https://stat.ethz.ch/mailman/listinfo/r-package-devel > > > > > > [[alternative HTML version deleted]] > > ______________________________________________ > R-package-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-package-devel -- Joshua Ulrich | about.me/joshuaulrich FOSS Trading | www.fosstrading.com ______________________________________________ R-package-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel