On 2024-04-18 9:41 a.m., Uwe Ligges wrote:


On 18.04.2024 15:35, Ben Bolker wrote:
    Yes, but ffbase was archived a long time ago (2022-04-04) and CRAN has apparently just caught up to checking.  What's a little frustrating (to me) is that the dependence of prediction on ffbase is *very* soft ("enhances") ...

No, but CRAN  has still not received an update and asked for this each month this year, so in Jan, Feb, and March without a response, so we assume prediction is unmaintained. Also, this was escalated to reverse depends.

Best,
Uwe Ligges

Fair enough. I'm not sure what the last sentence ("this was escalated to reverse depends") means though ...

FWIW I did get an e-mail response from the maintainer two days ago suggesting that they were preparing a resubmission ...




On 2024-04-18 9:28 a.m., Thierry Onkelinx wrote:
The cascade is even longer. prediction got archived because ffbase was no longer available. https://cran.r-project.org/web/packages/ffbase/ <https://cran.r-project.org/web/packages/ffbase/>

ir. Thierry Onkelinx
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Op do 18 apr 2024 om 15:25 schreef Ben Bolker <bbol...@gmail.com <mailto:bbol...@gmail.com>>:

        Thank you! (I know about package_dependencies() but ran into
    precisely the same problem and didn't want to re-implement it ...)

    On 2024-04-18 9:11 a.m., Josiah Parry wrote:
     > Well, after trying to install the package, I believe the issue is
     > because margins has been archived.
     >
     > https://cran.r-project.org/web/packages/margins/index.html
    <https://cran.r-project.org/web/packages/margins/index.html>
     > <https://cran.r-project.org/web/packages/margins/index.html
    <https://cran.r-project.org/web/packages/margins/index.html>>
     >
     > You can check recursive dependencies using
     > `tools::package_dependencies("pkg", recursive = TRUE)` which
    would help
     > you in this case. I couldn't run it since the package is not
    available
     > on CRAN, however.
     >
     >
     > On Thu, Apr 18, 2024 at 9:05 AM Ben Bolker <bbol...@gmail.com
    <mailto:bbol...@gmail.com>
     > <mailto:bbol...@gmail.com <mailto:bbol...@gmail.com>>> wrote:
     >
     >         The 'dotwhisker' package was archived on CRAN: from
     > https://cran.r-project.org/web/packages/dotwhisker/index.html
    <https://cran.r-project.org/web/packages/dotwhisker/index.html>
     >  <https://cran.r-project.org/web/packages/dotwhisker/index.html
    <https://cran.r-project.org/web/packages/dotwhisker/index.html>>
     >
     >           Package ‘dotwhisker’ was removed from the CRAN repository
     >           ...
     >
     >           Archived on 2024-04-12 as requires archived package
    'prediction'.
     >
     >          However, I can't for the life of me see where this
    dependence
     >     could
     >     come from. Neither the DESCRIPTION file of the last-archived
    version on
     >     CRAN
     >  <https://cran.r-project.org/src/contrib/Archive/dotwhisker/dotwhisker_0.8.1.tar.gz <https://cran.r-project.org/src/contrib/Archive/dotwhisker/dotwhisker_0.8.1.tar.gz> <https://cran.r-project.org/src/contrib/Archive/dotwhisker/dotwhisker_0.8.1.tar.gz <https://cran.r-project.org/src/contrib/Archive/dotwhisker/dotwhisker_0.8.1.tar.gz>>>,
     >     nor the version on github
    <https://github.com/fsolt/dotwhisker
    <https://github.com/fsolt/dotwhisker>
     >     <https://github.com/fsolt/dotwhisker
    <https://github.com/fsolt/dotwhisker>>>, seem to
     >     show any signs of importing prediction ... ?? I suppose there's a
     >     possibility of a recursive dependence, but in that case why
    wouldn't
     >     the
     >     direct dependence be reported?
     >
     >     Depends: R (>= 3.2.0), ggplot2 (>= 2.2.1),
     >     Imports: grid, gtable, gridExtra, stats, parameters, performance,
     >               patchwork, margins, dplyr, stringr, ggstance,
    rlang, purrr
     >     Suggests: ordinal, tibble, knitr, rmarkdown, broom
     >
     >         What am I missing?
     >
     >         (I'm concerned because I have packages that Suggest:
    dotwhisker,
     >     and
     >     the absence of the package from repos is breaking GitHub Actions
     >     checks ...)
     >
     >
     >         (This is cross-posted from an issue on the dotwhisker GH
     >     repository:
     > https://github.com/fsolt/dotwhisker/issues/115
    <https://github.com/fsolt/dotwhisker/issues/115>
     >     <https://github.com/fsolt/dotwhisker/issues/115
    <https://github.com/fsolt/dotwhisker/issues/115>>)
     >
     >     ______________________________________________
     > R-package-devel@r-project.org
    <mailto:R-package-devel@r-project.org>
    <mailto:R-package-devel@r-project.org
    <mailto:R-package-devel@r-project.org>>
     >     mailing list
     > https://stat.ethz.ch/mailman/listinfo/r-package-devel
    <https://stat.ethz.ch/mailman/listinfo/r-package-devel>
     >     <https://stat.ethz.ch/mailman/listinfo/r-package-devel
    <https://stat.ethz.ch/mailman/listinfo/r-package-devel>>
     >

    --     Dr. Benjamin Bolker
    Professor, Mathematics & Statistics and Biology, McMaster University
    Director, School of Computational Science and Engineering
    (Acting) Graduate chair, Mathematics & Statistics
      > E-mail is sent at my convenience; I don't expect replies outside of
    working hours.

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--
Dr. Benjamin Bolker
Professor, Mathematics & Statistics and Biology, McMaster University
Director, School of Computational Science and Engineering
(Acting) Graduate chair, Mathematics & Statistics
> E-mail is sent at my convenience; I don't expect replies outside of working hours.

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