В Thu, 15 Aug 2024 18:58:41 +0000 anj5x...@nilly.addy.io пишет: > This seems like it should work. Unfortunately my rhub github actions > is failing to get past the setup deps step which has been occuring > inconsistently in the past but right now it's consistently failing to > build deps so I can't confirm it work.
This may be worth reporting to the rhub developers. The error is really strange. It looks like the package at https://github.com/cran/igraph/releases/download/2.0.3/igraph_2.0.3_b1_R4.5_x86_64-pc-linux-gnu-fedora-38.tar.gz (referenced from https://github.com/r-hub/repos) has a binary dependency on OpenBLAS: $ readelf -d igraph/libs/igraph.so | grep openblas 0x0000000000000001 (NEEDED) Shared library: [libopenblasp.so.0] ...but that's either not noted or not installed correctly. > I was also unable to successfully build R using intel compilers, even > when using Rhubs container as template. If you'd like to dig deeper, feel free to ask here with details. > In case anyone else comes across this, the genmod files end up in > `src` even if the original source files are under a subdirectory so > the recipe ends up being: > > > -rm -f *genmod.f90 Thank you for letting us know! > I installed intel compilers and checked the `ifx` man page. Could not > find an option for turning off generation of the genmod files. I experimented with the "ghcr.io/r-hub/containers/intel:latest" container and was able to find out that the option -[no]gen-interfaces controls the generation of *__genmod* files: /opt/intel/oneapi/compiler/latest/bin/ifx -O3 -fp-model precise \ -warn all,noexternals -c -o arpack/dgetv0.o arpack/dgetv0.f; \ ls *genmod* # ... # dgetv0__genmod.f90 dgetv0__genmod.mod rm -vf *genmod* # removed 'dgetv0__genmod.f90' # removed 'dgetv0__genmod.mod' /opt/intel/oneapi/compiler/latest/bin/ifx -nogen-interfaces -O3 \ -fp-model precise -warn all,noexternals -c -o arpack/dgetv0.o \ arpack/dgetv0.f; \ ls *genmod* # ... # ls: cannot access '*genmod*': No such file or directory This option is already used as part of the "Intel" additional checks performed by Prof. Brian D. Ripley, so the *__genmod.* files should not be a problem on CRAN: https://svn.r-project.org/R-dev-web/trunk/CRAN/QA/BDR/gannet/Intel/config.site -- Best regards, Ivan ______________________________________________ R-package-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel
