I see a plain package error:
In file included from simple.cpp:2:0:
/home/drz/R/x86_64-pc-linux-gnu-library/3.4/TMB/include/TMB.hpp:53:23:
fatal error: Eigen/Dense: No such file or directory
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
compilation terminated.
/usr/lib/R/etc/Makeconf:168: recipe for target 'simple.o' failed
make: *** [simple.o] Error 1
Maybe talk to the TMB maintainer?
The good news is that you can TMB (and more) pre-built from Michael's PPA.
Here I launch a quick docker container I have with his PPA pre-set:
edd@rob:~$ docker run --rm -ti rocker/r-apt:trusty bash
root@7f81af56c277:/# apt-get update 2>&1 > /dev/null
W: Size of file
/var/lib/apt/lists/security.ubuntu.com_ubuntu_dists_trusty-security_multiverse_binary-amd64_Packages.gz
is not what the server reported 4718 4727
root@7f81af56c277:/# apt-cache policy r-cran-sjplot
N: Unable to locate package r-cran-sjplot
root@7f81af56c277:/# apt-cache policy r-cran-tmb
r-cran-tmb:
Installed: (none)
Candidate: 1.7.14-1cran1ppa0trusty0
Version table:
1.7.14-1cran1ppa0trusty0 0
500 http://ppa.launchpad.net/marutter/c2d4u/ubuntu/ trusty/main amd64
Packages
root@7f81af56c277:/#
So version 1.7.14 of TMB is there. I can install the first half of your list
from .deb packages:
‘TMB’,‘blme’, ‘arm’, ‘effects’,
but the remainder would come from source (apart from lme4)
‘ggeffects’, ‘glmmTMB’, ‘lme4’, ‘merTools’, ‘sjstats’
and would pull quite a tail of other packages so I did not proceed.
Dirk
--
http://dirk.eddelbuettel.com | @eddelbuettel | e...@debian.org
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