Dear all, I am running a glmm with glmmTMB in which the fixed part has two factor varialbes, year (ano_medida) and habitat type (Grupos_Finais below). Since I have only two years I do not mind that the model takes the first year as a baseline. However, no habitat type is a control or a reference, and I would like to see results for all levels of this variable. I would like to know how to manually do this, but I am only finding in the internet resources to change the reference level, not to cancel it. Could anyone help me with this?
modelo2.glmm = glmmTMB(reproducao_bin ~ ano_medida + Basal_Area_m2*Grupos_Finais + R_dens_total*Grupos_Finais + (1|numero) + (1 |bloco/transecto/parcela), family = binomial, data = dados) My data: > str(dados) 'data.frame': 1428 obs. of 12 variables: $ numero : int 4006 4009 4010 4020 4022 4024 4025 4027 4035 4036 ... $ bloco : int 1 1 1 1 1 1 1 1 1 1 ... $ transecto : int 1 1 1 1 1 1 1 1 1 1 ... $ parcela : int 1 1 1 1 1 1 1 1 1 1 ... $ Tree_Height_m_Fuste_Parc: num 8.32 8.32 8.32 8.32 8.32 ... $ Grupos_Finais : Factor w/ 3 levels "Disturbed Unflooded Forests",..: 1 1 1 1 1 1 1 1 1 1 ... $ ano_medida : Factor w/ 2 levels "2016","2017": 1 1 1 1 1 1 1 1 1 1 ... $ Basal_Area_m2 : num 0.182 0.182 0.182 0.182 0.182 ... $ das_mm : num 185 161 167 114 164 ... $ reproducao : int 3 0 0 0 0 0 0 0 0 0 ... $ reproducao_bin : int 1 0 0 0 0 0 0 0 0 0 ... $ R_dens_total : int 31 31 31 31 31 31 31 31 31 31 ... > Many thanks! Alexandre -- Dr. Alexandre F. Souza Professor Associado Departamento de Ecologia/CB Universidade Federal do Rio Grande do Norte Campus Universitário - Lagoa Nova 59072-970 - Natal, RN - Brasil lattes: lattes.cnpq.br/7844758818522706 http://www.esferacientifica.com.br https://www.youtube.com/user/alexfadigas http://www.docente.ufrn.br/alexsouza orcid.org/0000-0001-7468-3631 <http://www.docente.ufrn.br/alexsouza> [[alternative HTML version deleted]] _______________________________________________ R-sig-ecology mailing list R-sig-ecology@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-ecology
