I might be wrong, but it looks like a permissions problem?
Personally, I install all packages as su: I open a terminal,
type su, enter the password, start R, install.packages("rgdal"),
select repository,
go through the installation and q() without saving the workspace. Then
exit su and exit the terminal. Use the software as a normal user.
Agus
El día 1 de junio de 2010 05:19, José Miguel Barrios
<jmbarri...@gmail.com> escribió:
> Hello list,
>
> I'm trying to install rgdal in kubuntu without success so far. I guess this
> is the reason why the installation of other packages I am interested in
> (spgrass6, spdep, ...) does not work either (?). Could it be a problem
> between my R version and rgdal version?
>
> I would appreciate any hint. Thanks,
>
> Miguel
>
> R version 2.10.1 (2009-12-14)
> i486-pc-linux-gnu
>
> locale:
> [1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C
> [3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8
> [5] LC_MONETARY=C LC_MESSAGES=en_US.UTF-8
> [7] LC_PAPER=en_US.UTF-8 LC_NAME=C
> [9] LC_ADDRESS=C LC_TELEPHONE=C
> [11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C
>
> attached base packages:
> [1] stats graphics grDevices utils datasets methods base
>
>
> * installing *source* package ‘rgdal’ ...
> gdal-config: gdal-config
> checking for gcc... gcc -std=gnu99
> checking for C compiler default output file name... a.out
> checking whether the C compiler works... yes
> checking whether we are cross compiling... no
> checking for suffix of executables...
> checking for suffix of object files... o
> checking whether we are using the GNU C compiler... yes
> checking whether gcc -std=gnu99 accepts -g... yes
> checking for gcc -std=gnu99 option to accept ANSI C... none needed
> checking how to run the C preprocessor... gcc -std=gnu99 -E
> checking for egrep... grep -E
> checking for ANSI C header files... yes
> checking for sys/types.h... yes
> checking for sys/stat.h... yes
>
> checking for stdlib.h... yes
> checking for string.h... yes
> checking for memory.h... yes
> checking for strings.h... yes
> checking for inttypes.h... yes
> checking for stdint.h... yes
> checking for unistd.h... yes
> checking proj_api.h usability... yes
> checking proj_api.h presence... yes
> checking for proj_api.h... yes
> checking for pj_init_plus in -lproj... yes
> Package CPP flags: -I/usr/include/gdal
> Package LIBS: -L/usr/lib -lgdal1.6.0
> configure: creating ./config.status
> config.status: creating src/Makevars
> ** libs
> g++ -I/usr/share/R/include -I/usr/include/gdal
> -I"/usr/local/lib/R/site-library/sp/include" -fpic -g -O2 -c
> OGR_write.cpp -o OGR_write.o
> /bin/bash: g++: command not found
> make: *** [OGR_write.o] Error 127
> ERROR: compilation failed for package ‘rgdal’
> * removing ‘/usr/local/lib/R/site-library/rgdal’
>
> The downloaded packages are in
> ‘/tmp/RtmpQ3P3w6/downloaded_packages’
> Warning message:
> In install.packages("rgdal") :
> installation of package 'rgdal' had non-zero exit status
>
> [[alternative HTML version deleted]]
>
>
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