After invoking update.packages() I was able to successfully run the script and generate the plots using all the file formats, including SVG. Thanks for your help. I appreciate it.
On Tue, Aug 20, 2019 at 8:35 PM Richard Fuhr <richard.f...@gmail.com> wrote: > I am an R newbie and when I upgraded to 3.6 I did nothing in addition (and > I didn’t reinstall any packages). > I don’t have a file in my home directory named .Rprofile or anything > similar to that name. > --- > Richard Fuhr > 206-524-8049 <(206)%20524-8049> land line > 206-491-5640 <(206)%20491-5640> cell phone > https://richardfuhr.neocities.org > > > > > > > On Aug 20, 2019, at 8:31 PM, Roy Mendelssohn - NOAA Federal < > roy.mendelss...@noaa.gov> wrote: > > Looks similar to mine. I am just guessing here, but did you upgrade to > 3.6 and not reinstall all of your packages? Or have you checked if you > have something in .Rprofile or the like that is setting the path to > something that conflicts? > > -Roy > > > On Aug 20, 2019, at 8:20 PM, Richard Fuhr <richard.f...@gmail.com> wrote: > > Roy, > > Thanks for testing it. > > I am running MacOS Mojave 10.14.6 > > When I invoke the commands interactively from within R, the system also > hangs when I try to create the SVG file. > > I don’t see an error message; it just hangs. > > Invoking sessionInfo() yields the following: > > > sessionInfo() > > R version 3.6.1 (2019-07-05) > Platform: x86_64-apple-darwin15.6.0 (64-bit) > Running under: macOS Mojave 10.14.6 > > Matrix products: default > BLAS: > /Library/Frameworks/R.framework/Versions/3.6/Resources/lib/libRblas.0.dylib > LAPACK: > /Library/Frameworks/R.framework/Versions/3.6/Resources/lib/libRlapack.dylib > > Random number generation: > RNG: Mersenne-Twister > Normal: Inversion > Sample: Rounding > > locale: > [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8 > > attached base packages: > [1] stats graphics grDevices utils datasets methods base > > loaded via a namespace (and not attached): > [1] compiler_3.6.1 > > > > Thanks, > > Richard > > > > > > > > On Aug 20, 2019, at 8:11 PM, Roy Mendelssohn - NOAA Federal < > roy.mendelss...@noaa.gov> wrote: > > Worked on my machine. I think you need to give more info, including what > version of the OS you are running, and from within R the result of > 'sessionInfo()', also what happens if you run it from within R, rather > than from RScript. > > HTH, > > -Roy > > > On Aug 20, 2019, at 7:27 PM, Richard Fuhr <richard.f...@gmail.com> wrote: > > I am sending this message again to the distribution list, and this time I > am > * making this message plain text > * attaching an R file called FuhrTest.R > * attaching an input file called FuhrTest.csv ( a small file but it does > duplicate the problem) > > The purpose of the code is to read the csv file, which consists of a few > dates and weights and to generate plots of the data using various formats. > > The formats PDF, JPG, PNG and SVG get successfully generated on my Linux > machine running the Pop!_OS distribution. > > However, on my Mac, using the identical R script, the system hangs when > trying to generate an SVG plot. > > I have also duplicated the problem interactively. > > If the lines to generate an SVG file are commented out on the Mac, then > the R code runs as desired. > > I invoked the script via the command > > Rscript FuhrTest.R > > So if someone can take a look at this case when running R on a Mac, that > would be very helpful. > > It would be nice to be able to generate SVG files using R on my Mac that > represent data plots > > > Thanks, > > > > Richard Fuhr > <FuhrTest.csv><FuhrTest.R>_______________________________________________ > R-SIG-Mac mailing list > R-SIG-Mac@r-project.org > https://stat.ethz.ch/mailman/listinfo/r-sig-mac > > > ********************** > "The contents of this message do not reflect any position of the U.S. > Government or NOAA." > ********************** > Roy Mendelssohn > Supervisory Operations Research Analyst > NOAA/NMFS > Environmental Research Division > Southwest Fisheries Science Center > ***Note new street address*** > 110 McAllister Way > Santa Cruz, CA 95060 > Phone: (831)-420-3666 > Fax: (831) 420-3980 > e-mail: roy.mendelss...@noaa.gov <roy.mendelss...@noaa.gov> www: > http://www.pfeg.noaa.gov/ > > "Old age and treachery will overcome youth and skill." > "From those who have been given much, much will be expected" > "the arc of the moral universe is long, but it bends toward justice" -MLK > Jr. > > > > ********************** > "The contents of this message do not reflect any position of the U.S. > Government or NOAA." > ********************** > Roy Mendelssohn > Supervisory Operations Research Analyst > NOAA/NMFS > Environmental Research Division > Southwest Fisheries Science Center > ***Note new street address*** > 110 McAllister Way > Santa Cruz, CA 95060 > Phone: (831)-420-3666 > Fax: (831) 420-3980 > e-mail: roy.mendelss...@noaa.gov <roy.mendelss...@noaa.gov> www: > http://www.pfeg.noaa.gov/ > > "Old age and treachery will overcome youth and skill." > "From those who have been given much, much will be expected" > "the arc of the moral universe is long, but it bends toward justice" -MLK > Jr. > > > -- Richard Fuhr 206-524-8049 land line 206-491-5640 cell phone https://richardfuhr.neocities.org [[alternative HTML version deleted]] _______________________________________________ R-SIG-Mac mailing list R-SIG-Mac@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-mac