My guess is that either it is the same issue as

https://stat.ethz.ch/pipermail/r-sig-mac/2024-September/015042.html

or there is a mismatch in the clang installation (Apple gratuitously updated to 
clang 17 in the middle of the Xcode 16.x series, and the 4.5.x binaries are 
still built with clang 16).

-pd



> On 21 Nov 2025, at 11.42, Vincent Carey <[email protected]> wrote:
> 
> I frequently find that attempts to install R packages that include
> C++ code encounter
> 
> /Users/.../Library/R/arm64/4.5/library/Rcpp/include/Rcpp/platform/compiler.h:37:10:
> fatal error:
>      'cmath' file not found
>   37 | #include <cmath>
>      |          ^~~~~~~
> 
> To rectify this, I manually prefix to the call to R with
> 
> PKG_CXXFLAGS=-I/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/c++/v1
> 
> Is there a configuration step I am missing?  I believe this is a stock
> installation of the R binary from CRAN, and a conventional installation of
> Xcode (16.4).
> 
>> sessionInfo()
> R version 4.5.1 (2025-06-13)
> Platform: aarch64-apple-darwin20
> Running under: macOS Sequoia 15.7.2
> 
> Matrix products: default
> BLAS:
> /Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/lib/libRblas.0.dylib
> 
> LAPACK:
> /Library/Frameworks/R.framework/Versions/4.5-arm64/Resources/lib/libRlapack.dylib;
> LAPACK version 3.12.1
> 
> -- 
> The information in this email is intended only for the p...{{dropped:15}}
> 
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-- 
Peter Dalgaard, Professor,
Center for Statistics, Copenhagen Business School
Solbjerg Plads 3, 2000 Frederiksberg, Denmark
Phone: (+45)38153501
Office: A 4.23
Email: [email protected]  Priv: [email protected]

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