This package has compiled code under inst/ . That is only going to
work for one architecture (unless a fat binary, which this is not).
Hardly 'from source', and you need to sort this out so the package is
source-only.
On Wed, 11 Aug 2010, Richard R. Liu wrote:
I am trying to install a package from source on R 2.11.1 patched running on Apple OS X
10.6.4 Snow Leopard. I have downloaded the package source to a local directory. When I
issue R CMD INSTALL from the Terminal only the 64-bit version is built. When I try to
install the source from the R GUI only the 32-bit version is built, but the build
produces an error ("unsupported file format which is not the architecture being
linked (i386)") and so does not succeed. I also tried installing the 32-bit version
from the command line by issuing the command R --arch i386 CMD INSTALL but that produced
the same error as installing from the R GUI
What do I need to do to build both versions?
Thanks,
Richard R. Liu
Dittingerstr. 33
CH-4053 Basel
Switzerland
Tel.: +41 61 331 10 47
Mobil: +41 79 708 67 66
Email: richard....@pueo-owl.ch
The output of the two attempts to install the package follow:
-------------------------
Install from command line
-------------------------
RRL-MacBookPro:~ sim$ R CMD INSTALL
/Users/sim/Downloads/Rlibstemmer_0.1-0.tar.gz
* installing to library ‘/Users/sim/Library/R/2.11/library’
* installing *source* package ‘Rlibstemmer’ ...
make: Nothing to be done for `all'.
** libs
*** arch - x86_64
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include
-I/Library/Frameworks/R.framework/Resources/include/x86_64
-I../inst/libstemmer_c/include -I/usr/local/include -fPIC -g -O2 -c
listAlgorithms.c -o listAlgorithms.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include
-I/Library/Frameworks/R.framework/Resources/include/x86_64
-I../inst/libstemmer_c/include -I/usr/local/include -fPIC -g -O2 -c
stemWords.c -o stemWords.o
gcc -arch x86_64 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names
-undefined dynamic_lookup -single_module -multiply_defined suppress
-L/usr/local/lib -o Rlibstemmer.so listAlgorithms.o stemWords.o
../inst/libstemmer_c/libstemmer.o -F/Library/Frameworks/R.framework/..
-framework R -Wl,-framework -Wl,CoreFoundation
installing to /Users/sim/Library/R/2.11/library/Rlibstemmer/libs/x86_64
** R
** inst
** preparing package for lazy loading
** help
No man pages found in package ‘Rlibstemmer’
*** installing help indices
** building package indices ...
** testing if installed package can be loaded
* DONE (Rlibstemmer)
------------------
Install from R GUI
------------------
* installing *source* package ‘Rlibstemmer’ ...
make: Nothing to be done for `all'.
** libs
*** arch - i386
gcc -arch i386 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include
-I/Library/Frameworks/R.framework/Resources/include/i386
-I../inst/libstemmer_c/include -I/usr/local/include -fPIC -g -O2 -c
listAlgorithms.c -o listAlgorithms.o
gcc -arch i386 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include
-I/Library/Frameworks/R.framework/Resources/include/i386
-I../inst/libstemmer_c/include -I/usr/local/include -fPIC -g -O2 -c
stemWords.c -o stemWords.o
gcc -arch i386 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names
-undefined dynamic_lookup -single_module -multiply_defined suppress
-L/usr/local/lib -o Rlibstemmer.so listAlgorithms.o stemWords.o
../inst/libstemmer_c/libstemmer.o -F/Library/Frameworks/R.framework/..
-framework R -Wl,-framework -Wl,CoreFoundation
ld: warning: in ../inst/libstemmer_c/libstemmer.o, file was built for
unsupported file format which is not the architecture being linked (i386)
installing to /Users/sim/Library/R/2.11/library/Rlibstemmer/libs/i386
** R
** inst
** preparing package for lazy loading
** help
No man pages found in package ‘Rlibstemmer’
*** installing help indices
** building package indices ...
** testing if installed package can be loaded
Error in dyn.load(file, DLLpath = DLLpath, ...) :
unable to load shared library
'/Users/sim/Library/R/2.11/library/Rlibstemmer/libs/i386/Rlibstemmer.so':
dlopen(/Users/sim/Library/R/2.11/library/Rlibstemmer/libs/i386/Rlibstemmer.so,
6): Symbol not found: _sb_stemmer_delete
Referenced from:
/Users/sim/Library/R/2.11/library/Rlibstemmer/libs/i386/Rlibstemmer.so
Expected in: flat namespace
in /Users/sim/Library/R/2.11/library/Rlibstemmer/libs/i386/Rlibstemmer.so
ERROR: loading failed
* removing ‘/Users/sim/Library/R/2.11/library/Rlibstemmer’
* restoring previous ‘/Users/sim/Library/R/2.11/library/Rlibstemmer’
--
Brian D. Ripley, rip...@stats.ox.ac.uk
Professor of Applied Statistics, http://www.stats.ox.ac.uk/~ripley/
University of Oxford, Tel: +44 1865 272861 (self)
1 South Parks Road, +44 1865 272866 (PA)
Oxford OX1 3TG, UK Fax: +44 1865 272595
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