Hello All, Does anybody know of a function that allows you to calculate the likelihood of a tree based on discrete data (not DNA) and a specified Q-matrix. I know that this must be going on as a step in lots of functions like fitDiscrete or ace but I am having some trouble figuring out how to do this short of writing the whole process from scratch. Any suggestions or pointers would be much appreciated.
Cheers -- *Heath Blackmon Graduate Research Assistant Dept of Biology - Box 19498 Univ. of Texas, Arlington Arlington, TX 76019 Office: ERB450 Phone 817-201-6174 * [[alternative HTML version deleted]] _______________________________________________ R-sig-phylo mailing list R-sig-phylo@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-phylo