Hi,
maybe you could perform a standard MCA and then you could use the scores as 
continuous vars in standard comparative methods (including phyl pca)

dont know if this helps..
best
paolo


________________________________________
Da: [email protected] [[email protected]] per 
conto di Danny Rojas [[email protected]]
Inviato: giovedì 25 aprile 2013 16.11
A: [email protected]
Oggetto: [R-sig-phylo] phylogenetic multiple correspondence analysis

Dear colleagues,

Anybody know if there is an alternative to the phylogenetic principal
component analysis of Revell (2009; Evolution 63-12: 3258–3268), let's say
a phylogenetic multiple correspondence analysis, to analyze non-continuous
variables? I would appreciate any suggestion.

Thanks in advance.

--
Danny Rojas, Ph.D.
Facultade de Bioloxía
Universidade de Vigo
http://rojasdanny.wordpress.com

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