Hi Jason - Graham Slater created an approach called MECCA that does this.
Slater GJ, Harmon LJ, Wegmann D, Joyce, P, Revell, LJ, Alfaro ME. (2012) Fitting models of continuous trait evolution to incompletely sampled comparative data using Approximate Bayesian Computation. Evolution 66: 752-762. You will be able do this in GEIGER 2.0 (coming soon) but for now the code is here: https://www.eeb.ucla.edu/gradstudents/slater/Graham/code.html. Luke On Oct 7, 2013, at 4:39 AM, Jason S <[email protected]> wrote: > > > Dear colleagues, > > > I have a callibrated genus-level phylogeny of a family and trait data for all > of its species. Does anyone know of a way to estimate the rate of evolution > of this trait according to a BM model? > > Jason > [[alternative HTML version deleted]] > > _______________________________________________ > R-sig-phylo mailing list - [email protected] > https://stat.ethz.ch/mailman/listinfo/r-sig-phylo > Searchable archive at http://www.mail-archive.com/[email protected]/ [[alternative HTML version deleted]] _______________________________________________ R-sig-phylo mailing list - [email protected] https://stat.ethz.ch/mailman/listinfo/r-sig-phylo Searchable archive at http://www.mail-archive.com/[email protected]/
