Hi all of r-sig-phylo,
I have a problem with the interpretation of my MCMC output from diversitree.
I performed BiSSE MCMC with 500000 iterations on a consensus tree with 110 tips. ESS is greater than 200 according to output diagnostics with Coda). I discarded the first half of the samples as burnin. However, the output e.g for speciation rate shows two regions of higher probabilities now. Could someone give a possible explanation of how to interprete this output or just give a hint? I attached the output for the speciation rate estimation below.
Thanks a lot. I appreciate any help!
Lena


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