HI Kamilla,
can you send me your code and data and what phangorn version are you using?
Cheers,
Klaus
On Tue, Jun 14, 2016 at 6:42 PM, Kamila Naxerova <knaxer...@partners.org>
wrote:
> Hi all,
>
> I am trying to attach bootstrap values to a small tree (just 4 taxa).
> plotBS() in the phangorn package gives me the following error:
>
> tree <- plotBS(phylotree,bstrees,type="phylogram",p=90)
>
> Error in if (drop[j]) next : missing value where TRUE/FALSE needed
>
>
> This error disappears and everything work great as soon as I have 5 taxa.
> But removing one always leads to this error, for multiple independent trees.
>
> Am I missing something obvious? Unfortunately I don’t understand the error
> message.
>
> Many thanks!
> Kamila
>
>
>
> The information in this e-mail is intended only for th...{{dropped:28}}
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