Hi there, apex can do this using the 'concatenate' function: https://github.com/thibautjombart/apex
Cheers Thibaut -- Dr Thibaut Jombart Lecturer, Department of Infectious Disease Epidemiology, Imperial College London Head of RECON: https://reconhub.github.io/ https://sites.google.com/site/thibautjombart/ https://github.com/thibautjombart Twitter: @TeebzR <https://twitter.com/TeebzR> On 12 September 2016 at 11:41, Bhuller, Ravneet < ravneet.bhulle...@imperial.ac.uk> wrote: > Dear Members, > > Any suggestions on how to concatenate the aligned gene sequences in fasta > format so as to get whole genome alignments? > I need whole genome alignments as an input to a phylogenetic tool. > > Many thanks, > > Rav > > _______________________________________________ > R-sig-phylo mailing list - R-sig-phylo@r-project.org > https://stat.ethz.ch/mailman/listinfo/r-sig-phylo > Searchable archive at http://www.mail-archive.com/r- > sig-ph...@r-project.org/ > [[alternative HTML version deleted]] _______________________________________________ R-sig-phylo mailing list - R-sig-phylo@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-phylo Searchable archive at http://www.mail-archive.com/r-sig-phylo@r-project.org/
