On 4 Jan 2017, at 16:03, Emmanuel Paradis <emmanuel.para...@ird.fr> wrote:
> This is a known feature of read.nexus(), see ape's FAQ: > > http://ape-package.ird.fr/ape_faq.html#Bayestrees > > This explains how to fix the problem. Oh, sorry. I should have read the FAQ before posting. If you are thinking about adding a force.multi option to read.nexus, is it worth also adding a tip.labels.start.at.zero option to read.nexus too, and just adding that little code snippet right at the end of the the read.nexus code? Yan _______________________________________________ R-sig-phylo mailing list - R-sig-phylo@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-phylo Searchable archive at http://www.mail-archive.com/r-sig-phylo@r-project.org/
