Hi Ian,
On Wed, Oct 5, 2011 at 2:32 PM, Ian Fellows <[email protected]> wrote:
> Hi All,
>
> I am getting a compiler seg fault with 0.9.6 and 0.9.7, however the error
> does not occur in 0.9.4.
>
> When running R CMD INSTALL the following error is given:
>
> util.h: In function 'Rcpp::XPtr<Class, standard_delete_finalizer<Class> >
> gergm::unwrap_robject(SEXPREC* const&) [with T =
> gergm::BinaryNet<gergm::Directed>]':
> util.h:30: internal compiler error: Segmentation fault
> Please submit a full bug report,
> with preprocessed source if appropriate.
> See <URL:http://developer.apple.com/bugreporter> for instructions.
I just tried to reinstall Rcpp on my mac:
R> install.packages('Rcpp', type='source')
And everything actually installs fine here:
R> sessionInfo()
R version 2.13.1 Patched (2011-09-15 r57010)
Platform: x86_64-apple-darwin9.8.0/x86_64 (64-bit)
[...]
Not sure what to suggest next, actually, but I guess something is
strange on your end? What version of XCode/gcc do you have installed?
Actually:
> R version 2.13.0 Patched (2011-05-19 r55960)
> Platform: x86_64-apple-darwin9.8.0/x86_64 (64-bit)
>
> i686-apple-darwin10-g++-4.2.1 (GCC) 4.2.1 (Apple Inc. build 5666) (dot 3)
Our gcc versions differ slightly:
$ g++ --version
i686-apple-darwin10-g++-4.2.1 (GCC) 4.2.1 (Apple Inc. build 5664)
Copyright (C) 2007 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
Hmmm,
-steve
--
Steve Lianoglou
Graduate Student: Computational Systems Biology
| Memorial Sloan-Kettering Cancer Center
| Weill Medical College of Cornell University
Contact Info: http://cbio.mskcc.org/~lianos/contact
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