Jonathan, I discussed this on R-SIG-Mac and I gave there also the whole sequence of installations and configurations I did. As this topic is not anymore Rcpp relevant I would like to refer you to the discussion on R-SIG-Mac: https://stat.ethz.ch/pipermail/r-sig-mac/2013-September/010264.html
Thanks again for your support! Best Simon On Sep 12, 2013, at 11:44 PM, Jonathan Olmsted <[email protected]> wrote: > Simon, I'm curious how you produced that log. It's not the output from > installing the port with the debug flag (i.e., -d), right? I'm curious to > take a look at mine for something specific. > > -Jonathan > > > > ------------------------------------------------------------------------- > J.P. Olmsted > > 029 Corwin (Office) > 130 Corwin Hall (Mail) > > Politics Department > Princeton University > Princeton, NJ 08544 > > > t: 609.258.6202 > f: 609.258.1110 > [email protected] > http://about.me/olmjo > ------------------------------------------------------------------------- > > > On Thu, Sep 12, 2013 at 2:18 PM, Simon Zehnder <[email protected]> wrote: > Romain, Jonathan, > > an update on the error I reported: This was due to some gettext failure in > the configuration of the R build on the Mac. I had to use the configure > options --with-included-gettext and everything worked after installation. For > a config.log if interested see here: > https://gist.github.com/anonymous/6541684. > > Thanks again for your quick help! > > > Best > > Simon > > On Sep 12, 2013, at 5:54 PM, Simon Zehnder <[email protected]> wrote: > > > Romain, Jonathan, > > > > many thanks for the quick response. This is actually very good to know, > > that the -lintl is not in there usually. What I will do is to recompile my > > R from sources - but this time without the option > > --with-valgrind-instrumentation. Hopefully this is the source of error. > > > > Coming back to this later with hopefully some positive results. > > > > Best > > > > Simon > > > > On Sep 12, 2013, at 5:47 PM, Jonathan Olmsted <[email protected]> > > wrote: > > > >> Any idea where that is coming from? It isn't coming from the Rcpp Makevars > >> or from a default Macports installation (as best as I can tell). I just > >> did an clean install of R from a clean Macports and then installed Rcpp > >> from within R. > >> > >> g++ -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup > >> -single_module -multiply_defined suppress -L/opt/local/lib > >> -Wl,-headerpad_max_install_names -arch x86_64 -o Rcpp.so Date.o Module.o > >> Rcpp_init.o Timer.o api.o attributes.o barrier.o exceptions.o > >> -F/opt/local/Library/Frameworks/R.framework/.. -framework R -Wl,-framework > >> -Wl,CoreFoundation > >> g++ -o libRcpp.dylib Date.o Module.o Rcpp_init.o Timer.o api.o > >> attributes.o barrier.o exceptions.o -dynamiclib > >> -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module > >> -multiply_defined suppress > >> -F/opt/local/Library/Frameworks/R.framework/.. -framework R -Wl,-framework > >> -Wl,CoreFoundation > >> ar qc libRcpp.a Date.o Module.o Rcpp_init.o Timer.o api.o attributes.o > >> barrier.o exceptions.o > >> > >> > >> > >> > >> ------------------------------------------------------------------------- > >> J.P. Olmsted > >> > >> 029 Corwin (Office) > >> 130 Corwin Hall (Mail) > >> > >> Politics Department > >> Princeton University > >> Princeton, NJ 08544 > >> > >> > >> t: 609.258.6202 > >> f: 609.258.1110 > >> [email protected] > >> http://about.me/olmjo > >> ------------------------------------------------------------------------- > >> > >> > >> On Thu, Sep 12, 2013 at 10:28 AM, Simon Zehnder <[email protected]> > >> wrote: > >> Dear Rcpp-Users and Rcpp-Devels, > >> > >> I had to reinstall my system lately and compiled R-3.0.1. I installed > >> several packages and all installations went well. Then I tried to install > >> Rcpp 0.10.4. and I got: > >> > >> R CMD INSTALL Rcpp > >> * installing to library ‘/Users/simonzehnder/Library/R/3.0/library’ > >> * installing *source* package ‘Rcpp’ ... > >> ** package ‘Rcpp’ successfully unpacked and MD5 sums checked > >> ** libs > >> g++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG > >> -I../inst/include/ -I/opt/local/include -fPIC -g -O2 -c Date.cpp -o > >> Date.o > >> g++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG > >> -I../inst/include/ -I/opt/local/include -fPIC -g -O2 -c Module.cpp -o > >> Module.o > >> gcc -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include > >> -DNDEBUG -I../inst/include/ -I/opt/local/include -fPIC -g -O2 -c > >> Rcpp_init.c -o Rcpp_init.o > >> g++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG > >> -I../inst/include/ -I/opt/local/include -fPIC -g -O2 -c Timer.cpp -o > >> Timer.o > >> g++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG > >> -I../inst/include/ -I/opt/local/include -fPIC -g -O2 -c api.cpp -o > >> api.o > >> g++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG > >> -I../inst/include/ -I/opt/local/include -fPIC -g -O2 -c > >> attributes.cpp -o attributes.o > >> g++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG > >> -I../inst/include/ -I/opt/local/include -fPIC -g -O2 -c barrier.cpp > >> -o barrier.o > >> g++ -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG > >> -I../inst/include/ -I/opt/local/include -fPIC -g -O2 -c > >> exceptions.cpp -o exceptions.o > >> g++ -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup > >> -single_module -multiply_defined suppress -L/opt/local/lib -o Rcpp.so > >> Date.o Module.o Rcpp_init.o Timer.o api.o attributes.o barrier.o > >> exceptions.o -F/Library/Frameworks/R.framework/.. -framework R -lintl > >> -Wl,-framework -Wl,CoreFoundation > >> g++ -o libRcpp.dylib Date.o Module.o Rcpp_init.o Timer.o api.o > >> attributes.o barrier.o exceptions.o -dynamiclib > >> -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module > >> -multiply_defined suppress -F/Library/Frameworks/R.framework/.. > >> -framework R -lintl -Wl,-framework -Wl,CoreFoundation > >> ld: library not found for -lintl > >> collect2: error: ld returned 1 exit status > >> make: *** [libRcpp] Error 1 > >> ERROR: compilation failed for package ‘Rcpp’ > >> * removing ‘/Users/simonzehnder/Library/R/3.0/library/Rcpp’ > >> > >> What is the intl library and what could be the error. > >> > >> My System: Mac OS X Mountain Lion 10.8.4, Macports gcc48 Compiler > >> > >> > >> Best > >> > >> Simon > >> _______________________________________________ > >> Rcpp-devel mailing list > >> [email protected] > >> https://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/rcpp-devel > >> > > > > _______________________________________________ > > Rcpp-devel mailing list > > [email protected] > > https://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/rcpp-devel > > _______________________________________________ Rcpp-devel mailing list [email protected] https://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/rcpp-devel
