Le 3 févr. 2014 à 20:35, Tal Galili <tal.gal...@gmail.com> a écrit :
> Dear all, > > Dirk - > I have now re-checked, and the package loads fine on my machine, and it is > completely synced with github. > The only files in my gitignore are: > .Rproj.user > .Rhistory > .RData > src/*.o > src/*.so > src/*.dll > So I suspect that the versions are indeed the same. > > Kevin - thanks. > > Romain - > I am glad you have an idea for what the problem might be. However, I am not > sure I understand how to proceed in fixing it. > > > Since the package is very minimalistic, any specific examples on what can be > improved would be of great help. My message was more or less aimee at kevin who volunteered to help you. I juqt wanted to give him some context. I'm sure kevin will be able to make sense of why i said. Otherwise i'll have a look, but not this week. Cheers, Romain > > Thanks everyone, > Tal > > > > > > > ----------------Contact > Details:------------------------------------------------------- > Contact me: tal.gal...@gmail.com | > Read me: www.talgalili.com (Hebrew) | www.biostatistics.co.il (Hebrew) | > www.r-statistics.com (English) > ---------------------------------------------------------------------------------------------- > > > > On Mon, Feb 3, 2014 at 9:12 PM, Romain Francois <rom...@r-enthusiasts.com> > wrote: >> The problem is likely to be that it was assumed that List derives from >> RObject. >> >> It used to, it does not anymore. >> >> Classes from the api now use a policy based design. See andrei >> alexandrescu's modern c++ book for the why and the how of policy based >> design. >> >> . >> >> Envoyé de mon iPhone >> >> Le 3 févr. 2014 à 20:01, Kevin Ushey <kevinus...@gmail.com> a écrit : >> >> > Hi Tal, >> > >> > I get the same error with the new CRAN Rcpp, 0.11.0. I'll try to take >> > a look later. >> > >> > -Kevin >> > >> > On Mon, Feb 3, 2014 at 10:32 AM, Tal Galili <tal.gal...@gmail.com> wrote: >> >> Dear Rcpp people, >> >> >> >> I am trying to get a new package to CRAN called {dendextendRcpp}. Here is >> >> the repos: >> >> https://github.com/talgalili/dendextendRcpp >> >> >> >> (note that this package relies on the {dendextend} which has just been >> >> released to CRAN today :) ) >> >> >> >> >> >> The package loads fine for me (on R-devel, with Windows 7), however Kurt >> >> Hornik (CRAN maintainer) could not get the package to load on Linux. >> >> Following is the error massage that he got. Any input (either here or on >> >> the >> >> git repo) will be most appreciated. >> >> >> >> With regards, >> >> Tal >> >> >> >> ======================== >> >> >> >> (p.s: I suspect this might be because I use .hpp files in src. Should I >> >> use >> >> something else?) >> >> >> >> >> >> >> >> * installing *source* package 'dendextendRcpp' ... >> >> ** libs >> >> clang++ -std=c++11 -I/home/Hornik/tmp/R-d-clang/include -DNDEBUG >> >> -I/usr/local/include >> >> -I"/home/Hornik/lib/R/Library/3.1/x86_64-linux-gnu/Rcpp/include" -fpic >> >> -g >> >> -O3 -Wall -Wno-unused -pedantic -c RcppExports.cpp -o RcppExports.o >> >> clang++ -std=c++11 -I/home/Hornik/tmp/R-d-clang/include -DNDEBUG >> >> -I/usr/local/include >> >> -I"/home/Hornik/lib/R/Library/3.1/x86_64-linux-gnu/Rcpp/include" -fpic >> >> -g >> >> -O3 -Wall -Wno-unused -pedantic -c cut_lower.cpp -o cut_lower.o >> >> cut_lower.cpp:35:7: error: no matching function for call to 'get_height' >> >> if(get_height(tree) <= height) { >> >> ^~~~~~~~~~ >> >> ./get_branches_heights.hpp:29:8: note: candidate function not viable: no >> >> known conversion from 'List' (aka 'Vector<19>') to 'RObject' (aka >> >> 'RObject_Impl<PreserveStorage>') for 1st argument >> >> double get_height(RObject x); >> >> ^ >> >> cut_lower.cpp:36:13: error: no matching member function for call to >> >> 'push_back' >> >> lower.push_back(tree); >> >> ~~~~~~^~~~~~~~~ >> >> /usr/bin/../lib/gcc/x86_64-linux-gnu/4.8/../../../../include/c++/4.8/bits/stl_vector.h:901:7: >> >> note: candidate function not viable: no known conversion from 'List' (aka >> >> 'Vector<19>') to 'const value_type' (aka 'const >> >> Rcpp::RObject_Impl<PreserveStorage>') for 1st argument >> >> push_back(const value_type& __x) >> >> ^ >> >> /usr/bin/../lib/gcc/x86_64-linux-gnu/4.8/../../../../include/c++/4.8/bits/stl_vector.h:919:7: >> >> note: candidate function not viable: no known conversion from 'List' (aka >> >> 'Vector<19>') to 'value_type' (aka 'Rcpp::RObject_Impl<PreserveStorage>') >> >> for 1st argument >> >> push_back(value_type&& __x) >> >> ^ >> >> cut_lower.cpp:84:7: error: no matching function for call to 'is_leaf' >> >> if(is_leaf( tree )) { >> >> ^~~~~~~ >> >> ./is_functions.hpp:35:6: note: candidate function not viable: no known >> >> conversion from 'List' (aka 'Vector<19>') to 'RObject' (aka >> >> 'RObject_Impl<PreserveStorage>') for 1st argument >> >> bool is_leaf(RObject x); >> >> ^ >> >> 3 errors generated. >> >> make: *** [cut_lower.o] Error 1 >> >> clang++ -std=c++11 -I/home/Hornik/tmp/R-d-clang/include -DNDEBUG >> >> -I/usr/local/include >> >> -I"/home/Hornik/lib/R/Library/3.1/x86_64-linux-gnu/Rcpp/include" -fpic >> >> -g >> >> -O3 -Wall -Wno-unused -pedantic -c cut_lower.cpp -o cut_lower.o >> >> cut_lower.cpp:35:7: error: no matching function for call to 'get_height' >> >> if(get_height(tree) <= height) { >> >> ^~~~~~~~~~ >> >> ./get_branches_heights.hpp:29:8: note: candidate function not viable: no >> >> known conversion from 'List' (aka 'Vector<19>') to 'RObject' (aka >> >> 'RObject_Impl<PreserveStorage>') for 1st argument >> >> double get_height(RObject x); >> >> ^ >> >> cut_lower.cpp:36:13: error: no matching member function for call to >> >> 'push_back' >> >> lower.push_back(tree); >> >> ~~~~~~^~~~~~~~~ >> >> /usr/bin/../lib/gcc/x86_64-linux-gnu/4.8/../../../../include/c++/4.8/bits/stl_vector.h:901:7: >> >> note: candidate function not viable: no known conversion from 'List' (aka >> >> 'Vector<19>') to 'const value_type' (aka 'const >> >> Rcpp::RObject_Impl<PreserveStorage>') for 1st argument >> >> push_back(const value_type& __x) >> >> ^ >> >> /usr/bin/../lib/gcc/x86_64-linux-gnu/4.8/../../../../include/c++/4.8/bits/stl_vector.h:919:7: >> >> note: candidate function not viable: no known conversion from 'List' (aka >> >> 'Vector<19>') to 'value_type' (aka 'Rcpp::RObject_Impl<PreserveStorage>') >> >> for 1st argument >> >> push_back(value_type&& __x) >> >> ^ >> >> cut_lower.cpp:84:7: error: no matching function for call to 'is_leaf' >> >> if(is_leaf( tree )) { >> >> ^~~~~~~ >> >> ./is_functions.hpp:35:6: note: candidate function not viable: no known >> >> conversion from 'List' (aka 'Vector<19>') to 'RObject' (aka >> >> 'RObject_Impl<PreserveStorage>') for 1st argument >> >> bool is_leaf(RObject x); >> >> ^ >> >> 3 errors generated. >> >> make: *** [cut_lower.o] Error 1 >> >> ERROR: compilation failed for package 'dendextendRcpp' >> >> * removing '/home/Hornik/tmp/CRAN/dendextendRcpp.Rcheck/dendextendRcpp' >> >> >> >> >> >> _______________________________________________ >> >> Rcpp-devel mailing list >> >> Rcpp-devel@lists.r-forge.r-project.org >> >> https://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/rcpp-devel >> > _______________________________________________ >> > Rcpp-devel mailing list >> > Rcpp-devel@lists.r-forge.r-project.org >> > https://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/rcpp-devel >
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