grrr, I uploaded the rdkit binaries to the wrong place. That's taken care of now too.
please try again. -greg On Tue, Aug 30, 2016 at 5:59 AM, Peter S. Shenkin <shen...@gmail.com> wrote: > Hi, Greg, > > That fails for me because it requires rdkit 3.4 at minimum. > > Earlier, I installed 3.1 using conda. There doesn't appear to be a way to > install 3.4 using conda. (I tried the default anaconda and also "-c > grelandrum".) > > -P. > > On Mon, Aug 29, 2016 at 10:55 PM, Greg Landrum <greg.land...@gmail.com> > wrote: > >> Sorry about that. The command I sent was wrong, and I had made a mistake >> when I uploaded the file. >> >> Please try this one: >> conda install -c greglandrum rdkit-postgresql95 >> >> -greg >> >> >> On Mon, Aug 29, 2016 at 10:47 PM, Peter S. Shenkin <shen...@gmail.com> >> wrote: >> >>> Hi, Greg, >>> >>> Thanks. I tried your invocation, but conda cannot find the package: >>> >>> (rdk0) > conda install -c https://conda.anaconda.org/greglandrum >>> rdkit-postgresql95 2>&1 | tee install_rdkit-postresql_fr_greglandrum.log >>> >>> Fetching package metadata ......... >>> Solving package specifications: . >>> Error: Package missing in current osx-64 channels: >>> - rdkit-postgresql95 >>> >>> Close matches found; did you mean one of these? >>> rdkit-postgresql95: postgresql >>> >>> You can search for packages on anaconda.org with >>> anaconda search -t conda rdkit-postgresql95 >>> >>> On Mon, Aug 29, 2016 at 2:52 AM, Greg Landrum <greg.land...@gmail.com> >>> wrote: >>> >>>> Hi Peter, >>>> >>>> Thanks for pointing out the conda postgresql build; it's great that >>>> they are providing this now (though it's a bit irritating that it doesn't >>>> have readline support). I was able to do a Mac build of the RDKit cartridge >>>> against that postgresql install this morning. >>>> >>>> Since this uses a different set of dependencies, I'm not comfortable >>>> pushing this to the main rdkit channel until after Riccardo and I have had >>>> a chance to talk about how we want to handle PostgreSQL going forward. In >>>> the meantime there is a Mac build in my channel at anaconda.org. It >>>> would be great if you could try this out and let me know if it works for >>>> you: >>>> conda install -c https://conda.anaconda.org/greglandrum >>>> rdkit-postgresql95 >>>> >>>> Best, >>>> -greg >>>> >>>> >>>> On Sat, Aug 27, 2016 at 7:49 AM, Peter S. Shenkin <shen...@gmail.com> >>>> wrote: >>>> >>>>> Thanks, Greg. I assumed that because the installation manager gave a >>>>> conda invocation for rdkit-postgresql, it must exist. Perhaps a bad >>>>> assumption, but that's why I guessed that it's just not been ported to OS >>>>> X. >>>>> >>>>> FWIW, there is a conda build of PostgreSQL, called "postgresql". >>>>> >>>>> Thanks again, >>>>> -P. >>>>> >>>>> -P. >>>>> >>>>> On Sat, Aug 27, 2016 at 12:56 AM, Greg Landrum <greg.land...@gmail.com >>>>> > wrote: >>>>> >>>>>> There just isn't a conda build (yet) for the cartridge (or, I >>>>>> believe, for PostgreSQL itself). >>>>>> >>>>>> I did a bit of looking this morning and it is going to require some >>>>>> work to get things working. >>>>>> >>>>>> >>>>>> >>>>>> >>>>>> >>>>>> On Sat, Aug 27, 2016 at 6:25 AM +0200, "Peter S. Shenkin" < >>>>>> shen...@gmail.com> wrote: >>>>>> >>>>>> Well, actually, thought I'd try the conda install of >>>>>>> rdkit-postgresql, using: >>>>>>> >>>>>>> conda install -c https://conda.binstar.org/rdkit rdkit-postgresql >>>>>>> >>>>>>> I get the message: >>>>>>> >>>>>>> Error: Package missing in current osx-64 channels: >>>>>>> - rdkit-postgresql >>>>>>> Close matches found; did you mean one of these? >>>>>>> rdkit-postgresql: postgresql >>>>>>> >>>>>>> >>>>>>> Is the cartridge not supported on OS X? >>>>>>> >>>>>>> -P. >>>>>>> >>>>>>> On Sat, Aug 27, 2016 at 12:10 AM, Greg Landrum < >>>>>>> greg.land...@gmail.com> wrote: >>>>>>> >>>>>>>> >>>>>>>> >>>>>>>> On Sat, Aug 27, 2016 at 5:23 AM, Peter S. Shenkin < >>>>>>>> shen...@gmail.com> wrote: >>>>>>>> >>>>>>>>> >>>>>>>>> Lazy execution rules. >>>>>>>>> >>>>>>>> >>>>>>>> :-) >>>>>>>> >>>>>>> >>>>>>> >>>>> >>>> >>> >> >
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