Dear Hannes,

in that case they are computed on the fly. Passing them in is a way to same time if you invoke GetO3A multiple times with the same molecules, just different conformations.

Cheers,
p.

On 05/26/17 15:53, Hannes Loeffler wrote:
On Thu, 25 May 2017 10:25:36 +0100
Paolo Tosco <paolo.to...@unito.it> wrote:

Dear Hannes,

the Open3DALIGN algorithm is described here:

/Journal of Computer-Aided Molecular Design/ *2011*, /25/, 777-783
doi <http://dx.doi.org/10.1007/s10822-011-9462-9>

Cheers,
p.
Many thanks.  This is really useful.

But what happens if the parameters prbPyMMFFMolProperties and
refPyMMFFMolProperties are not set (they are both None by default)?


Many thanks,
Hannes.

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