Author: bugman
Date: Wed Jan 21 14:03:24 2015
New Revision: 27256
URL: http://svn.gna.org/viewcvs/relax?rev=27256&view=rev
Log:
Fix for the lib.sequence_alignment.substitution_matrices.BLOSUM62_SEQ string.
Modified:
trunk/lib/sequence_alignment/substitution_matrices.py
Modified: trunk/lib/sequence_alignment/substitution_matrices.py
URL:
http://svn.gna.org/viewcvs/relax/trunk/lib/sequence_alignment/substitution_matrices.py?rev=27256&r1=27255&r2=27256&view=diff
==============================================================================
--- trunk/lib/sequence_alignment/substitution_matrices.py (original)
+++ trunk/lib/sequence_alignment/substitution_matrices.py Wed Jan 21
14:03:24 2015
@@ -26,7 +26,7 @@
from numpy import array, int16
-BLOSUM62_SEQ = ['ARNDCQEGHILKMFPSTWYVBZX*']
+BLOSUM62_SEQ = 'ARNDCQEGHILKMFPSTWYVBZX*'
BLOSUM62 = array([
[ 4, -1, -2, -2, 0, -1, -1, 0, -2, -1, -1, -1, -1, -2, -1, 1, 0, -3,
-2, 0, -2, -1, 0, -4],
[-1, 5, 0, -2, -3, 1, 0, -2, 0, -3, -2, 2, -1, -3, -2, -1, -1, -3,
-2, -3, -1, 0, -1, -4],
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