Hi, How did you get this error? For me the test-suite is passing all tests. Did you revert the commit as I mentioned at http://thread.gmane.org/gmane.science.nmr.relax.scm/19691/focus=4871 ?
Regards, Edward On 10 December 2013 16:30, Troels Emtekær Linnet <[email protected]> wrote: > Hi Edward. > > I get this warning for a R1rho dataset I am trying. > > ------ > File > "/Users/tlinnet/software/relax_trunk/test_suite/system_tests/relax_disp.py", > line 2590, in test_r1rho_kjaergaard > relax_disp.Relax_disp(pipe_name=pipe_name, pipe_bundle=pipe_bundle, > results_dir=ds.tmpdir, models=MODELS, grid_inc=GRID_INC, mc_sim_num=MC_NUM, > modsel=MODSEL) > File "/Users/tlinnet/software/relax_trunk/auto_analyses/relax_disp.py", > line 116, in __init__ > self.run() > File "/Users/tlinnet/software/relax_trunk/auto_analyses/relax_disp.py", > line 451, in run > self.optimise(model=model) > File "/Users/tlinnet/software/relax_trunk/auto_analyses/relax_disp.py", > line 350, in optimise > self.interpreter.grid_search(inc=self.grid_inc) > File "/Users/tlinnet/software/relax_trunk/prompt/uf_objects.py", line 221, > in __call__ > self._backend(*new_args, **uf_kargs) > File "/Users/tlinnet/software/relax_trunk/pipe_control/minimise.py", line > 152, in grid_search > grid_search(lower=lower, upper=upper, inc=inc, constraints=constraints, > verbosity=verbosity) > File > "/Users/tlinnet/software/relax_trunk/specific_analyses/relax_disp/api.py", > line 1093, in grid_search > self.minimise(min_algor='grid', lower=lower, upper=upper, inc=inc, > constraints=constraints, verbosity=verbosity, sim_index=sim_index) > File > "/Users/tlinnet/software/relax_trunk/specific_analyses/relax_disp/api.py", > line 1142, in minimise > self._minimise_r2eff(min_algor=min_algor, min_options=min_options, > func_tol=func_tol, grad_tol=grad_tol, max_iterations=max_iterations, > constraints=constraints, scaling=scaling, verbosity=verbosity, > sim_index=sim_index, lower=lower, upper=upper, inc=inc) > File > "/Users/tlinnet/software/relax_trunk/specific_analyses/relax_disp/api.py", > line 382, in _minimise_r2eff > values.append(average_intensity(spin=spin, exp_type=exp_type, frq=frq, > point=point, time=time, sim_index=sim_index)) > File > "/Users/tlinnet/software/relax_trunk/specific_analyses/relax_disp/disp_data.py", > line 112, in average_intensity > int_keys = find_intensity_keys(exp_type=exp_type, frq=frq, point=point, > time=time) > File > "/Users/tlinnet/software/relax_trunk/specific_analyses/relax_disp/disp_data.py", > line 345, in find_intensity_keys > raise RelaxError("No intensity data could be found corresponding to the > spectrometer frequency of %s MHz, dispersion point of %s and relaxation time > of %s s." % (frq*1e-6, point, time)) > RelaxError: RelaxError: No intensity data could be found corresponding to > the spectrometer frequency of 799.7773991 MHz, dispersion point of 431.0 and > relaxation time of 0.14 s. > ----- > > It is true, that there is no intensity for this combination. > > But does relax not accept incomplete datasets ? > > I guess this is related to: > http://thread.gmane.org/gmane.science.nmr.relax.scm/19695 > > Where it loops over each experiment type, spectrometer frequency, offset and > dispersion point. > > > > Best > Troels > > > Troels Emtekær Linnet > > _______________________________________________ > relax (http://www.nmr-relax.com) > > This is the relax-devel mailing list > [email protected] > > To unsubscribe from this list, get a password > reminder, or change your subscription options, > visit the list information page at > https://mail.gna.org/listinfo/relax-devel > _______________________________________________ relax (http://www.nmr-relax.com) This is the relax-devel mailing list [email protected] To unsubscribe from this list, get a password reminder, or change your subscription options, visit the list information page at https://mail.gna.org/listinfo/relax-devel
