Hi Troels, This looks like a problem with the current data checks prior to executing the auto-analysis. To fix this, I would recommend the following steps:
1) First, I would recommend creating a bug report. It would be good to attach a relax save state for this problem with data from a single spin system, saved just before clicking on 'Execute'. If you have such a state file already for the entire system, the spin editor window can be used to delete all but one spin (which may itself reveal more bugs, but this is a good thing :). 2) Once the bug report is created with the save state attached, a system test can be created which loads the state file, saved in the test_suite/shared_data directories, and executes the auto-analysis, triggering the bug. 3) Fix the bug and close the report. 4) Optimisation of the system test - by making sure it doesn't take more than 1-2 seconds. Hidden optimisation settings in the auto-analysis can be used for this. Would you like to give this a go? Cheers, Edward On 17 February 2014 17:24, Troels Emtekær Linnet <[email protected]> wrote: > Hi Edward. > > I have setup a CPMG analysis for a dataset obtained at two fields. > The data is also recorded at two delay times. > > The setup looks like this in the GUI. > http://cdn.imghack.se/images/4dc2eadbea2862889374daa148177347.png > > Last lines of output from relax > ------------------------------------- > relax> state.save(state='compare_setup', dir=None, compress_type=1, > force=True) > Opening the file 'compare_setup.bz2' for writing. > - The 'R2eff' model - > > relax> pipe.copy(pipe_from='compare_128_FT', pipe_to='compare_128_FT_R2eff', > bundle_to='cpmg_disp_sod1d90a') > > relax> pipe.switch(pipe_name='compare_128_FT_R2eff') > > relax> relax_disp.select_model(model='R2eff') > R2eff/R1rho value and error determination. > > relax> calc(verbosity=1) > RelaxError: The experiment 'SQ CPMG' is not of the fixed relaxation time > period data type. > ----------------------------------------- > > Would it be possible to modify relax to allow this? > > Best > Troels > > _______________________________________________ > relax (http://www.nmr-relax.com) > > This is the relax-devel mailing list > [email protected] > > To unsubscribe from this list, get a password > reminder, or change your subscription options, > visit the list information page at > https://mail.gna.org/listinfo/relax-devel > _______________________________________________ relax (http://www.nmr-relax.com) This is the relax-devel mailing list [email protected] To unsubscribe from this list, get a password reminder, or change your subscription options, visit the list information page at https://mail.gna.org/listinfo/relax-devel
