Hi Troels, For the unit tests, the test names as seen in the relax printouts are not unique! The directories they are in are though, it is just that the full module path is not shown (this is to be added one day, when someone has the time). Therefore it looks like tests are repeated, though this is not the case. The unit test infrastructure is also quite different to the system and GUI tests, it uses a much more advanced and automated framework written by Gary Thompson, and it is not possible to run individual tests via the command line interface to relax.
However if you go into the test_suite/unit_tests directory, you can use the very flexible unit_test_runner.py script written by Gary to run individual tests. Note that this script is suffering from bit-rot in the functions used to operate the script on the command line, and hence might need a bit of work to get it running again properly. Most, but not all, of this file is imported into relax to execute the unit tests within relax. The parts that are not imported or used by the imported classes are those with the bit-rot. Regards, Edward On 19 February 2014 15:41, Troels Emtekær Linnet <[email protected]> wrote: > Hi Edward. > > Runnning the unit tests, I get that some are dublicated? > > relax -u --time > test.txt > > grep '^\.' test.txt | awk '{print $5}' | sort | uniq -d > 298 are dublicated > ----------------------------- > Test_align_tensor.test_copy_fail. > Test_align_tensor.test_copy_pull. > Test_align_tensor.test_copy_push. > Test_align_tensor.test_delete. > Test_align_tensor.test_delete_fail_no_data. > Test_align_tensor.test_delete_fail_no_pipe. > Test_align_tensor.test_display. > Test_align_tensor.test_display_fail_no_data. > Test_align_tensor.test_display_fail_no_pipe. > Test_align_tensor.test_init. > Test_align_tensor.test_init_bad_angle_units. > Test_align_tensor.test_matrix_angles_identity. > Test_align_tensor.test_svd_identity. > Test_diffusion_tensor.test_copy_pull_ellipsoid. > Test_diffusion_tensor.test_copy_pull_sphere. > Test_diffusion_tensor.test_copy_pull_spheroid. > Test_diffusion_tensor.test_copy_push_ellipsoid. > Test_diffusion_tensor.test_copy_push_sphere. > Test_diffusion_tensor.test_copy_push_spheroid. > Test_diffusion_tensor.test_delete. > Test_diffusion_tensor.test_delete_fail_no_data. > Test_diffusion_tensor.test_delete_fail_no_pipe. > Test_diffusion_tensor.test_display_ellipsoid. > Test_diffusion_tensor.test_display_fail_no_data. > Test_diffusion_tensor.test_display_fail_no_pipe. > Test_diffusion_tensor.test_display_sphere. > Test_diffusion_tensor.test_display_spheroid. > Test_diffusion_tensor.test_init_bad_angle_units. > Test_diffusion_tensor.test_init_ellipsoid. > Test_diffusion_tensor.test_init_sphere. > Test_diffusion_tensor.test_init_spheroid. > Test___init__.test___all__. > Test_molecule.test_copy_molecule_between_pipes. > Test_molecule.test_copy_molecule_between_pipes_fail_no_pipe. > Test_molecule.test_copy_molecule_within_pipe. > Test_molecule.test_copy_molecule_within_pipe_fail. > Test_molecule.test_create_molecule. > Test_molecule.test_create_molecule_fail. > Test_molecule.test_delete_molecule. > Test_molecule.test_delete_molecule_all. > Test_molecule.test_delete_molecule_fail. > Test_molecule.test_display_molecule. > Test_molecule.test_display_molecule_fail. > Test_molecule.test_name_molecule. > Test_molecule.test_name_molecule_fail. > Test_molecule.test_name_molecule_many_fail. > Test_relax_data.test_read. > Test_residue.test_copy_residue_between_molecules. > Test_residue.test_copy_residue_between_pipes. > Test_residue.test_copy_residue_between_pipes_fail_no_pipe. > Test_residue.test_copy_residue_within_molecule. > Test_residue.test_copy_residue_within_molecule_fail1. > Test_residue.test_copy_residue_within_molecule_fail2. > Test_residue.test_create_residue. > Test_residue.test_create_residue_fail. > Test_residue.test_delete_residue_all. > Test_residue.test_delete_residue_fail. > Test_residue.test_delete_residue_name. > Test_residue.test_delete_residue_num. > Test_residue.test_delete_residue_shift. > Test_residue.test_display_residue. > Test_residue.test_display_residue_fail. > Test_residue.test_name_residue. > Test_residue.test_name_residue_many. > Test_residue.test_name_residue_no_spin. > Test_residue.test_number_residue. > Test_residue.test_number_residue_many_fail. > Test_residue.test_number_residue_no_spin. > Test_sequence.test_copy_protein_sequence. > Test_sequence.test_display_protein_sequence. > Test_sequence.test_read_protein_noe_data. > Test_sequence.test_write_protein_sequence. > Test_spin.test_copy_spin. > Test_spin.test_copy_spin_between_molecules. > Test_spin.test_copy_spin_between_pipes. > Test_spin.test_copy_spin_between_pipes_fail. > Test_spin.test_copy_spin_between_residues. > Test_spin.test_copy_spin_fail1. > Test_spin.test_copy_spin_fail2. > Test_spin.test_copy_spin_fail3. > Test_spin.test_copy_spin_fail4. > Test_spin.test_create_pseudo_spin. > Test_spin.test_create_pseudo_spin2. > Test_spin.test_create_spin. > Test_spin.test_create_spin_fail. > Test_spin.test_delete_spin_all. > Test_spin.test_delete_spin_name. > Test_spin.test_delete_spin_num. > Test_spin.test_delete_spin_shift. > Test_spin.test_display_spin. > Test_spin.test_name_spin. > Test_spin.test_name_spin_many. > Test_spin.test_number_spin. > Test_spin.test_number_spin_many_fail. > Test_state.test_load. > Test_state.test_load_and_modify. > Test_state.test_load_and_reset. > Test_state.test_save. > Test_value.test_set_ct_all_spins_csa. > Test_value.test_set_ct_all_spins_diff_j0_f_eta_f_r2. > Test_value.test_set_ct_all_spins_f_eta. > Test_value.test_set_ct_all_spins_f_r2. > Test_value.test_set_ct_all_spins_j0. > Test_value.test_set_ct_all_spins_orientation. > Test_value.test_set_ct_all_spins_same_j0_f_eta_f_r2. > Test_value.test_set_ct_all_spins_tc. > Test_value.test_set_ct_defaults_csa. > Test_value.test_set_ct_defaults_f_eta. > Test_value.test_set_ct_defaults_f_r2. > Test_value.test_set_ct_defaults_j0. > Test_value.test_set_ct_defaults_j0_f_eta_f_r2. > Test_value.test_set_ct_defaults_orientation. > Test_value.test_set_ct_defaults_tc. > Test_value.test_set_ct_single_spin_csa. > Test_value.test_set_ct_single_spin_diff_j0_f_eta_f_r2. > Test_value.test_set_ct_single_spin_f_eta. > Test_value.test_set_ct_single_spin_f_r2. > Test_value.test_set_ct_single_spin_j0. > Test_value.test_set_ct_single_spin_orientation. > Test_value.test_set_ct_single_spin_same_j0_f_eta_f_r2. > Test_value.test_set_ct_single_spin_tc. > Test_value.test_set_jw_all_spins_csa. > Test_value.test_set_jw_all_spins_diff_j0_jwx_jwh. > Test_value.test_set_jw_all_spins_j0. > Test_value.test_set_jw_all_spins_jwh. > Test_value.test_set_jw_all_spins_jwx. > Test_value.test_set_jw_all_spins_same_j0_jwx_jwh. > Test_value.test_set_jw_defaults_csa. > Test_value.test_set_jw_defaults_j0. > Test_value.test_set_jw_defaults_j0_jwx_jwh. > Test_value.test_set_jw_defaults_jwh. > Test_value.test_set_jw_defaults_jwx. > Test_value.test_set_jw_single_spin_csa. > Test_value.test_set_jw_single_spin_diff_j0_jwx_jwh. > Test_value.test_set_jw_single_spin_j0. > Test_value.test_set_jw_single_spin_jwh. > Test_value.test_set_jw_single_spin_jwx. > Test_value.test_set_jw_single_spin_same_j0_jwx_jwh. > Test_value.test_set_mf_all_spins_csa. > Test_value.test_set_mf_all_spins_diff_s2f_s2s. > Test_value.test_set_mf_all_spins_local_tm. > Test_value.test_set_mf_all_spins_rex. > Test_value.test_set_mf_all_spins_s2. > Test_value.test_set_mf_all_spins_s2f. > Test_value.test_set_mf_all_spins_s2s. > Test_value.test_set_mf_all_spins_same_s2f_s2s. > Test_value.test_set_mf_all_spins_te. > Test_value.test_set_mf_all_spins_tf. > Test_value.test_set_mf_all_spins_ts. > Test_value.test_set_mf_defaults_csa. > Test_value.test_set_mf_defaults_local_tm. > Test_value.test_set_mf_defaults_rex. > Test_value.test_set_mf_defaults_s2. > Test_value.test_set_mf_defaults_s2f. > Test_value.test_set_mf_defaults_s2f_s2s. > Test_value.test_set_mf_defaults_s2s. > Test_value.test_set_mf_defaults_te. > Test_value.test_set_mf_defaults_tf. > Test_value.test_set_mf_defaults_ts. > Test_value.test_set_mf_diff_ellipsoid_default_alpha. > Test_value.test_set_mf_diff_ellipsoid_default_beta. > Test_value.test_set_mf_diff_ellipsoid_default_Da. > Test_value.test_set_mf_diff_ellipsoid_default_diff_tm_Da_Dr. > Test_value.test_set_mf_diff_ellipsoid_default_Diso. > Test_value.test_set_mf_diff_ellipsoid_default_Diso_Da_Dr. > Test_value.test_set_mf_diff_ellipsoid_default_Dpar. > Test_value.test_set_mf_diff_ellipsoid_default_Dper. > Test_value.test_set_mf_diff_ellipsoid_default_Dr. > Test_value.test_set_mf_diff_ellipsoid_default_Dratio. > Test_value.test_set_mf_diff_ellipsoid_default_Dx. > Test_value.test_set_mf_diff_ellipsoid_default_Dx_Dy_Dz. > Test_value.test_set_mf_diff_ellipsoid_default_Dy. > Test_value.test_set_mf_diff_ellipsoid_default_Dz. > Test_value.test_set_mf_diff_ellipsoid_default_gamma. > Test_value.test_set_mf_diff_ellipsoid_default_phi. > Test_value.test_set_mf_diff_ellipsoid_default_theta. > Test_value.test_set_mf_diff_ellipsoid_default_tm. > Test_value.test_set_mf_diff_ellipsoid_default_tm_Diso_Dr. > Test_value.test_set_mf_diff_ellipsoid_set_alpha. > Test_value.test_set_mf_diff_ellipsoid_set_beta. > Test_value.test_set_mf_diff_ellipsoid_set_Da. > Test_value.test_set_mf_diff_ellipsoid_set_diff_Diso_Da_Dr. > Test_value.test_set_mf_diff_ellipsoid_set_diff_Dx_Dy_Dz. > Test_value.test_set_mf_diff_ellipsoid_set_diff_tm_Da_Dr. > Test_value.test_set_mf_diff_ellipsoid_set_diff_tm_Diso_Dr. > Test_value.test_set_mf_diff_ellipsoid_set_Diso. > Test_value.test_set_mf_diff_ellipsoid_set_Dpar. > Test_value.test_set_mf_diff_ellipsoid_set_Dper. > Test_value.test_set_mf_diff_ellipsoid_set_Dr. > Test_value.test_set_mf_diff_ellipsoid_set_Dratio. > Test_value.test_set_mf_diff_ellipsoid_set_Dx. > Test_value.test_set_mf_diff_ellipsoid_set_Dy. > Test_value.test_set_mf_diff_ellipsoid_set_Dz. > Test_value.test_set_mf_diff_ellipsoid_set_gamma. > Test_value.test_set_mf_diff_ellipsoid_set_phi. > Test_value.test_set_mf_diff_ellipsoid_set_same_Dx_Dy_Dz. > Test_value.test_set_mf_diff_ellipsoid_set_theta. > Test_value.test_set_mf_diff_ellipsoid_set_tm. > Test_value.test_set_mf_diff_sphere_default_alpha. > Test_value.test_set_mf_diff_sphere_default_beta. > Test_value.test_set_mf_diff_sphere_default_Da. > Test_value.test_set_mf_diff_sphere_default_Diso. > Test_value.test_set_mf_diff_sphere_default_Dpar. > Test_value.test_set_mf_diff_sphere_default_Dper. > Test_value.test_set_mf_diff_sphere_default_Dr. > Test_value.test_set_mf_diff_sphere_default_Dratio. > Test_value.test_set_mf_diff_sphere_default_Dx. > Test_value.test_set_mf_diff_sphere_default_Dy. > Test_value.test_set_mf_diff_sphere_default_Dz. > Test_value.test_set_mf_diff_sphere_default_gamma. > Test_value.test_set_mf_diff_sphere_default_phi. > Test_value.test_set_mf_diff_sphere_default_theta. > Test_value.test_set_mf_diff_sphere_default_tm. > Test_value.test_set_mf_diff_sphere_set_alpha. > Test_value.test_set_mf_diff_sphere_set_beta. > Test_value.test_set_mf_diff_sphere_set_Da. > Test_value.test_set_mf_diff_sphere_set_Diso. > Test_value.test_set_mf_diff_sphere_set_Dpar. > Test_value.test_set_mf_diff_sphere_set_Dper. > Test_value.test_set_mf_diff_sphere_set_Dr. > Test_value.test_set_mf_diff_sphere_set_Dratio. > Test_value.test_set_mf_diff_sphere_set_Dx. > Test_value.test_set_mf_diff_sphere_set_Dy. > Test_value.test_set_mf_diff_sphere_set_Dz. > Test_value.test_set_mf_diff_sphere_set_gamma. > Test_value.test_set_mf_diff_sphere_set_phi. > Test_value.test_set_mf_diff_sphere_set_theta. > Test_value.test_set_mf_diff_sphere_set_tm. > Test_value.test_set_mf_diff_spheroid_default_alpha. > Test_value.test_set_mf_diff_spheroid_default_beta. > Test_value.test_set_mf_diff_spheroid_default_Da. > Test_value.test_set_mf_diff_spheroid_default_Diso. > Test_value.test_set_mf_diff_spheroid_default_Diso_Da. > Test_value.test_set_mf_diff_spheroid_default_Diso_Dratio. > Test_value.test_set_mf_diff_spheroid_default_Dpar. > Test_value.test_set_mf_diff_spheroid_default_Dpar_Dper. > Test_value.test_set_mf_diff_spheroid_default_Dpar_Dratio. > Test_value.test_set_mf_diff_spheroid_default_Dper. > Test_value.test_set_mf_diff_spheroid_default_Dper_Dpar. > Test_value.test_set_mf_diff_spheroid_default_Dr. > Test_value.test_set_mf_diff_spheroid_default_Dratio. > Test_value.test_set_mf_diff_spheroid_default_Dx. > Test_value.test_set_mf_diff_spheroid_default_Dy. > Test_value.test_set_mf_diff_spheroid_default_Dz. > Test_value.test_set_mf_diff_spheroid_default_gamma. > Test_value.test_set_mf_diff_spheroid_default_phi. > Test_value.test_set_mf_diff_spheroid_default_theta. > Test_value.test_set_mf_diff_spheroid_default_tm. > Test_value.test_set_mf_diff_spheroid_default_tm_Da. > Test_value.test_set_mf_diff_spheroid_default_tm_Dratio. > Test_value.test_set_mf_diff_spheroid_set_alpha. > Test_value.test_set_mf_diff_spheroid_set_beta. > Test_value.test_set_mf_diff_spheroid_set_Da. > Test_value.test_set_mf_diff_spheroid_set_diff_Diso_Da. > Test_value.test_set_mf_diff_spheroid_set_diff_Diso_Dratio. > Test_value.test_set_mf_diff_spheroid_set_diff_Dpar_Dper. > Test_value.test_set_mf_diff_spheroid_set_diff_Dpar_Dratio. > Test_value.test_set_mf_diff_spheroid_set_diff_Dper_Dpar. > Test_value.test_set_mf_diff_spheroid_set_diff_tm_Da. > Test_value.test_set_mf_diff_spheroid_set_diff_tm_Dratio. > Test_value.test_set_mf_diff_spheroid_set_Diso. > Test_value.test_set_mf_diff_spheroid_set_Dpar. > Test_value.test_set_mf_diff_spheroid_set_Dper. > Test_value.test_set_mf_diff_spheroid_set_Dr. > Test_value.test_set_mf_diff_spheroid_set_Dratio. > Test_value.test_set_mf_diff_spheroid_set_Dx. > Test_value.test_set_mf_diff_spheroid_set_Dy. > Test_value.test_set_mf_diff_spheroid_set_Dz. > Test_value.test_set_mf_diff_spheroid_set_gamma. > Test_value.test_set_mf_diff_spheroid_set_phi. > Test_value.test_set_mf_diff_spheroid_set_theta. > Test_value.test_set_mf_diff_spheroid_set_tm. > Test_value.test_set_mf_single_spin_csa. > Test_value.test_set_mf_single_spin_diff_s2f_s2s. > Test_value.test_set_mf_single_spin_local_tm. > Test_value.test_set_mf_single_spin_rex. > Test_value.test_set_mf_single_spin_s2. > Test_value.test_set_mf_single_spin_s2f. > Test_value.test_set_mf_single_spin_s2s. > Test_value.test_set_mf_single_spin_same_s2f_s2s. > Test_value.test_set_mf_single_spin_te. > Test_value.test_set_mf_single_spin_tf. > Test_value.test_set_mf_single_spin_ts. > Test_value.test_set_n_state_model_rx. > Test_value.test_set_relax_fit_all_spins_diff_i0_iinf. > Test_value.test_set_relax_fit_all_spins_i0. > Test_value.test_set_relax_fit_all_spins_iinf. > Test_value.test_set_relax_fit_all_spins_rx. > Test_value.test_set_relax_fit_all_spins_same_i0_iinf. > Test_value.test_set_relax_fit_defaults_i0. > Test_value.test_set_relax_fit_defaults_i0_iinf. > Test_value.test_set_relax_fit_defaults_iinf. > Test_value.test_set_relax_fit_defaults_rx. > Test_value.test_set_relax_fit_single_spin_diff_i0_iinf. > Test_value.test_set_relax_fit_single_spin_i0. > Test_value.test_set_relax_fit_single_spin_iinf. > Test_value.test_set_relax_fit_single_spin_rx. > Test_value.test_set_relax_fit_single_spin_same_i0_iinf. > > > -- > Troels Emtekær Linnet > PhD student > Copenhagen University > SBiNLab, 3-0-41 > Ole Maaloes Vej 5 > 2200 Copenhagen N > Tlf: +45 353-22083 > Lync Tlf: +45 353-30195 > > _______________________________________________ > relax (http://www.nmr-relax.com) > > This is the relax-devel mailing list > [email protected] > > To unsubscribe from this list, get a password > reminder, or change your subscription options, > visit the list information page at > https://mail.gna.org/listinfo/relax-devel > _______________________________________________ relax (http://www.nmr-relax.com) This is the 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