I've now managed to replicate this problem on one test system. It is caused by the following two changes:
r24257 - http://article.gmane.org/gmane.science.nmr.relax.scm/22007 r24263 - http://article.gmane.org/gmane.science.nmr.relax.scm/22013 As these are not part of any relax release, no bug report is needed. I'll fix this in trunk. Cheers, Edward On 30 June 2014 09:48, Edward d'Auvergne <[email protected]> wrote: > Hi, > > This is very strange. You can try and see if the help system for the > Python installed on that machine is functional. Just run the same > Python as is running relax, and try help(dir) or something similar. > It seems to be a Python rather than relax issue, however it could be > that the special relax help system for the prompt UI is at fault. > > Regards, > > Edward > > > > On 30 June 2014 09:42, Troels Emtekær Linnet <[email protected]> wrote: >> Hi Ed. >> >> This happens when I try to access the help function. >> >> relax> help(relax_disp) >> WARNING: terminal is not fully functional >> - (press RETURN) >> >> [tlinnet@haddock Troels_Relax_Point]$ relax_tomat -i >> >> >> >> relax repository checkout rNone >> None >> >> Molecular dynamics by NMR data analysis >> >> Copyright (C) 2001-2006 Edward d'Auvergne >> Copyright (C) 2006-2014 the relax development team >> >> This is free software which you are welcome to modify and redistribute >> under the conditions of the >> GNU General Public License (GPL). This program, including all >> modules, is licensed under the GPL >> and comes with absolutely no warranty. For details type 'GPL' within >> the relax prompt. >> >> Assistance in using the relax prompt and scripting interface can be >> accessed by typing 'help' within >> the prompt. >> >> Processor fabric: Uni-processor. >> >> >> Hardware information: >> Machine: x86_64 >> Processor: x86_64 >> Processor name: Intel(R) Xeon(R) CPU E5645 @ 2.40GHz >> Endianness: little >> Total RAM size: 24013 Mb >> Total swap size: 26191 Mb >> >> Operating system information: >> System: Linux >> Release: 2.6.32-431.5.1.el6.x86_64 >> Version: #1 SMP Fri Jan 10 14:46:43 EST 2014 >> GNU/Linux version: Red Hat Enterprise Linux Server 6.5 Santiago >> Distribution: redhat 6.5 Santiago >> Full platform string: >> Linux-2.6.32-431.5.1.el6.x86_64-x86_64-with-redhat-6.5-Santiago >> >> Python information: >> Architecture: 64bit ELF >> Python version: 2.6.6 >> Python branch: tags/r266 >> Python build: r266:84292, Nov 21 2013 10:50:32 >> Python compiler: GCC 4.4.7 20120313 (Red Hat 4.4.7-4) >> Libc version: glibc 2.2.5 >> Python implementation: CPython >> Python revision: 84292 >> Python executable: /usr/bin/python >> Python flags: sys.flags(debug=0, py3k_warning=0, >> division_warning=0, division_new=0, inspect=0, interactive=0, >> optimize=0, dont_write_bytecode=0, no_user_site=0, no_site=0, >> ignore_environment=0, tabcheck=0, verbose=0, unicode=0, >> bytes_warning=0, hash_randomization=0) >> Python float info: >> sys.floatinfo(max=1.7976931348623157e+308, max_exp=1024, >> max_10_exp=308, min=2.2250738585072014e-308, min_exp=-1021, >> min_10_exp=-307, dig=15, mant_dig=53, epsilon=2.2204460492503131e-16, >> radix=2, rounds=1) >> Python module path: >> ['/sbinlab2/tlinnet/software/NMR-relax/disp_spin_speed', >> '/sbinlab2/software/CCP4-Linux_6.3.0/ccp4-6.3.0/share/python', >> '/sbinlab2/tlinnet/phd/estA/2014_06_30_Kaare_presentation_Novo/Tue_CPMG/20131228/Troels_Relax_Point', >> '/sbinlab2/software/x64/haddock2.1', >> '/sbinlab2/software/x64/lib64/python2.6/site-packages', >> '/sbinlab2/software/x64/ccpnmr/ccpnmr2.3/python', >> '/usr/lib64/python26.zip', '/usr/lib64/python2.6', >> '/usr/lib64/python2.6/plat-linux2', '/usr/lib64/python2.6/lib-tk', >> '/usr/lib64/python2.6/lib-old', '/usr/lib64/python2.6/lib-dynload', >> '/usr/lib64/python2.6/site-packages', >> '/usr/lib64/python2.6/site-packages/gst-0.10', >> '/usr/lib64/python2.6/site-packages/gtk-2.0', >> '/usr/lib64/python2.6/site-packages/webkit-1.0', >> '/usr/lib64/python2.6/site-packages/wx-2.8-gtk2-unicode', >> '/usr/lib/python2.6/site-packages', >> '/usr/lib/python2.6/site-packages/setuptools-0.6c11-py2.6.egg-info'] >> >> Python packages and modules (most are optional): >> >> Name Installed Version Path >> minfx True 1.0.7 >> /sbinlab2/tlinnet/software/NMR-relax/disp_spin_speed/minfx >> bmrblib True 1.0.3 >> /usr/lib/python2.6/site-packages/bmrblib >> numpy True 1.4.1 >> /usr/lib64/python2.6/site-packages/numpy >> scipy True 0.7.2 >> /usr/lib64/python2.6/site-packages/scipy >> wxPython True 2.8.12.0 (gtk2-unicode) >> /usr/lib64/python2.6/site-packages/wx-2.8-gtk2-unicode/wx >> matplotlib True 0.99.1.1 >> /usr/lib64/python2.6/site-packages/matplotlib >> mpi4py True 1.3.1 >> /usr/lib64/python2.6/site-packages/mpi4py >> epydoc False >> optparse True 1.5.3 >> /usr/lib64/python2.6/optparse.pyc >> readline True >> /usr/lib64/python2.6/lib-dynload/readline.so >> profile True >> /usr/lib64/python2.6/profile.pyc >> bz2 True >> /usr/lib64/python2.6/lib-dynload/bz2.so >> gzip True >> /usr/lib64/python2.6/gzip.pyc >> io True >> /usr/lib64/python2.6/io.pyc >> xml True 0.8.4 (PyXML) >> /usr/lib64/python2.6/site-packages/_xmlplus/__init__.pyc >> xml.dom.minidom True >> /usr/lib64/python2.6/site-packages/_xmlplus/dom/minidom.pyc >> >> relax information: >> Version: repository checkout >> Processor fabric: Uni-processor. >> >> relax C modules: >> >> Module Compiled File type >> Path >> target_functions.relax_fit True ELF 64-bit LSB shared >> object, x86-64, version 1 (SYSV), dynamically linked, not stripped >> /sbinlab2/tlinnet/software/NMR-relax/disp_spin_speed/target_functions/relax_fit.so >> >> >> >> >> -- >> Troels Emtekær Linnet >> PhD student >> Copenhagen University >> SBiNLab, 3-0-41 >> Ole Maaloes Vej 5 >> 2200 Copenhagen N >> Tlf: +45 353-22083 >> Lync Tlf: +45 353-30195 >> >> _______________________________________________ >> relax (http://www.nmr-relax.com) >> >> This is the relax-devel mailing list >> [email protected] >> >> To unsubscribe from this list, get a password >> reminder, or change your subscription options, >> visit the list information page at >> https://mail.gna.org/listinfo/relax-devel _______________________________________________ relax (http://www.nmr-relax.com) This is the relax-devel mailing list [email protected] To unsubscribe from this list, get a password reminder, or change your subscription options, visit the list information page at https://mail.gna.org/listinfo/relax-devel
