Hi Edward. I won't add this feature, as I have no motivation to do so, or any test data to test against.
The feature of this branch was only for purpose of R1rho plotting. Not to extend functionality to CPMG. The code is "quite close" to be easy to extend for CPMG. But there is no purpose to use any more time on this. Best Troels 2014-07-31 15:16 GMT+02:00 Edward d'Auvergne <[email protected]>: > Hi, > > I'm not sure if this check is needed. I've been watching your changes > and it looks like the interpolation will work. Well, I've been trying > to direct you in the right direction so that your feature will > automatically work with CPMG data. It's just that we have no > synthetic or measured data to test this against. But it will be > exactly the same code for the R1rho data - unmodified - which will do > the interpolation for the CPMG as well. > > Cheers, > > Edward > > > > On 31 July 2014 15:12, <[email protected]> wrote: >> Author: tlinnet >> Date: Thu Jul 31 15:12:13 2014 >> New Revision: 24876 >> >> URL: http://svn.gna.org/viewcvs/relax?rev=24876&view=rev >> Log: >> Added check function for relax_disp. This function check if interpolating >> against offset for non-R1 exp types, and will raise an Error. >> >> sr #3124(https://gna.org/support/?3124): Grace graphs production for R1rho >> analysis with R2_eff as function of Omega_eff. >> sr #3138(https://gna.org/support/?3138): Interpolating theta through >> spin-lock offset [Omega], rather than spin-lock field strength [w1]. >> >> Modified: >> branches/r1rho_plotting/specific_analyses/relax_disp/checks.py >> >> Modified: branches/r1rho_plotting/specific_analyses/relax_disp/checks.py >> URL: >> http://svn.gna.org/viewcvs/relax/branches/r1rho_plotting/specific_analyses/relax_disp/checks.py?rev=24876&r1=24875&r2=24876&view=diff >> ============================================================================== >> --- branches/r1rho_plotting/specific_analyses/relax_disp/checks.py >> (original) >> +++ branches/r1rho_plotting/specific_analyses/relax_disp/checks.py Thu >> Jul 31 15:12:13 2014 >> @@ -114,6 +114,20 @@ >> raise RelaxError("The experiment '%s' is not of the fixed >> relaxation time period data type." % exp_type) >> >> >> +def check_interpolate_offset_cpmg_model(interpolate=None): >> + """Check interpolating through offsets in CPMG models. >> + >> + @keyword interpolate: How to interpolate the fitted curves. >> Either by option "%s" which interpolate CPMG frequency or spin-lock field >> strength, or by option "%s" which interpole over spin-lock offset. >> + @type interpolate: str >> + @raises RelaxFuncSetupError: If the interpolate method is set to >> 'offset' for not-R1rho models. >> + """%(specific_analyses.relax_disp.data.INTERPOLATE_DISP, >> specific_analyses.relax_disp.data.INTERPOLATE_OFFSET) >> + >> + # Check if interpolating against offset for CPMG models. >> + # This is currently not implemented, and will raise an error. >> + if not specific_analyses.relax_disp.data.has_r1rho_exp_type() and >> interpolate == specific_analyses.relax_disp.data.INTERPOLATE_OFFSET: >> + raise RelaxFuncSetupError("interpolating against Spin-lock offset >> for CPMG models") >> + >> + >> def check_mixed_curve_types(): >> """Prevent both fixed time and exponential curves from being analysed >> simultaneously. >> >> >> >> _______________________________________________ >> relax (http://www.nmr-relax.com) >> >> This is the relax-commits mailing list >> [email protected] >> >> To unsubscribe from this list, get a password >> reminder, or change your subscription options, >> visit the list information page at >> https://mail.gna.org/listinfo/relax-commits > > _______________________________________________ > relax (http://www.nmr-relax.com) > > This is the relax-devel mailing list > [email protected] > > To unsubscribe from this list, get a password > reminder, or change your subscription options, > visit the list information page at > https://mail.gna.org/listinfo/relax-devel _______________________________________________ relax (http://www.nmr-relax.com) This is the relax-devel mailing list [email protected] To unsubscribe from this list, get a password reminder, or change your subscription options, visit the list information page at https://mail.gna.org/listinfo/relax-devel
