Hmmm, I'll have to see what your code does which causes these private data structures to be outdated, and hence not present. These temporary and volatile structures are created and maintained by the pipe_control.mol_res_spin.metadata_*() functions. A change in the specific analysis code should not trigger such a problem unless something funky is being done with the spin containers (that should not be done).
Regards, Edward On 7 October 2014 16:51, Troels Emtekær Linnet <[email protected]> wrote: > Hi Edward. > > Yes, I saw the same. > > I did know how to fix that. > > I dont know why " 'MoleculeContainer' object has no attribute > '_res_name_count'". > > Is it because the spins are created manually? > > Best > Troels > > > 2014-10-07 16:47 GMT+02:00 Edward d'Auvergne <[email protected]>: >> >> Hi Troels, >> >> I'm thinking of releasing relax 3.3.1 with all of the recent bugfixes >> and minor improvements. There are enough changes to make this >> worthwhile. However I can see that there is still an issue with the >> unit tests: >> >> $ ./relax -u test_suite.unit_tests._pipe_control.test_value --time >> [snip] >> ====================================================================== >> ERROR: test_value_set_r1_rit >> (test_suite.unit_tests._pipe_control.test_value.Test_value) >> Test of the pipe_control.value.set() function. >> ---------------------------------------------------------------------- >> The spectrum ID 'test' is now set to the R1rho-type experiment. >> Traceback (most recent call last): >> File >> "/data/relax/relax-trunk/test_suite/unit_tests/_pipe_control/test_value.py", >> line 180, in test_value_set_r1_rit >> value.set(val=None, param='r2') >> File "/data/relax/relax-trunk/pipe_control/value.py", line 424, in set >> api.set_param_values(param=param, value=val, index=index, >> spin_id=spin_id, error=error, force=force) >> File "/data/relax/relax-trunk/specific_analyses/relax_disp/api.py", >> line 1182, in set_param_values >> for spin_ids in self.model_loop(): >> File "/data/relax/relax-trunk/specific_analyses/relax_disp/api.py", >> line 868, in model_loop >> for spin, spin_id in spin_loop(return_id=True): >> File "/data/relax/relax-trunk/pipe_control/mol_res_spin.py", line >> 3808, in spin_loop >> spin_id = generate_spin_id_unique(pipe_cont=dp, mol=mol, res=res, >> spin=spin) >> File "/data/relax/relax-trunk/pipe_control/mol_res_spin.py", line >> 1497, in generate_spin_id_unique >> if res and res.name != None and mol._res_name_count[res.name] > 1: >> AttributeError: 'MoleculeContainer' object has no attribute >> '_res_name_count' >> >> ---------------------------------------------------------------------- >> >> Using bisection (via svn up -rxxxxxx), I can see that this failure was >> introduced at your commit r26161 >> (http://article.gmane.org/gmane.science.nmr.relax.scm/23913). Once >> this is fixed, I'll look at pushing out all the changes into relax >> 3.3.1. Or do you have some important changes in mind that you think >> should go into this release, rather than in relax 3.3.2? >> >> Cheers, >> >> Edward >> >> _______________________________________________ >> relax (http://www.nmr-relax.com) >> >> This is the relax-devel mailing list >> [email protected] >> >> To unsubscribe from this list, get a password >> reminder, or change your subscription options, >> visit the list information page at >> https://mail.gna.org/listinfo/relax-devel > > _______________________________________________ relax (http://www.nmr-relax.com) This is the relax-devel mailing list [email protected] To unsubscribe from this list, get a password reminder, or change your subscription options, visit the list information page at https://mail.gna.org/listinfo/relax-devel
