Github user mengxr commented on a diff in the pull request:
https://github.com/apache/spark/pull/1727#discussion_r15729985
--- Diff: examples/src/main/python/mllib/tree.py ---
@@ -0,0 +1,129 @@
+#
+# Licensed to the Apache Software Foundation (ASF) under one or more
+# contributor license agreements. See the NOTICE file distributed with
+# this work for additional information regarding copyright ownership.
+# The ASF licenses this file to You under the Apache License, Version 2.0
+# (the "License"); you may not use this file except in compliance with
+# the License. You may obtain a copy of the License at
+#
+# http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+#
+
+"""
+Decision tree classification and regression using MLlib.
+"""
+
+import numpy, os, sys
+
+from operator import add
+
+from pyspark import SparkContext
+from pyspark.mllib.regression import LabeledPoint
+from pyspark.mllib.tree import DecisionTree
+from pyspark.mllib.util import MLUtils
+
+
+def getAccuracy(dtModel, data):
+ """
+ Return accuracy of DecisionTreeModel on the given RDD[LabeledPoint].
+ """
+ seqOp = (lambda acc, x: acc + (x[0] == x[1]))
+ predictions = dtModel.predict(data.map(lambda x: x.features))
+ truth = data.map(lambda p: p.label)
+ trainCorrect = predictions.zip(truth).aggregate(0, seqOp, add)
+ return trainCorrect / (0.0 + data.count())
+
+
+def getMSE(dtModel, data):
+ """
+ Return mean squared error (MSE) of DecisionTreeModel on the given
+ RDD[LabeledPoint].
+ """
+ seqOp = (lambda acc, x: acc + numpy.square(x[0] - x[1]))
+ predictions = dtModel.predict(data.map(lambda x: x.features))
+ truth = data.map(lambda p: p.label)
+ trainMSE = predictions.zip(truth).aggregate(0, seqOp, add)
+ return trainMSE / (0.0 + data.count())
+
+
+def reindexClassLabels(data):
+ """
+ Re-index class labels in a dataset to the range {0,...,numClasses-1}.
+ If all labels in that range already appear at least once,
+ then the returned RDD is the same one (without a mapping).
+ Note: If a label simply does not appear in the data,
+ the index will not include it.
+ Be aware of this when reindexing subsampled data.
+ :param data: RDD of LabeledPoint where labels are integer values
+ denoting labels for a classification problem.
+ :return: Pair (reindexedData, origToNewLabels) where
+ reindexedData is an RDD of LabeledPoint with labels in
+ the range {0,...,numClasses-1}, and
+ origToNewLabels is a dictionary mapping original labels
+ to new labels.
+ """
+ # classCounts: class --> # examples in class
+ classCounts = data.map(lambda x: x.label).countByValue()
+ numExamples = sum(classCounts.values())
+ sortedClasses = sorted(classCounts.keys())
+ numClasses = len(classCounts)
+ # origToNewLabels: class --> index in 0,...,numClasses-1
+ if (numClasses < 2):
+ print >> sys.stderr, \
+ "Dataset for classification should have at least 2 classes." +
\
+ " The given dataset had only %d classes." % numClasses
+ exit(-1)
+ origToNewLabels = dict([(sortedClasses[i], i) for i in
range(0,numClasses)])
+
+ print "numClasses = %d" % numClasses
+ print "Per-class example fractions, counts:"
+ print "Class\tFrac\tCount"
+ for c in sortedClasses:
+ frac = classCounts[c] / (numExamples + 0.0)
+ print "%g\t%g\t%d" % (c, frac, classCounts[c])
+
+ if (sortedClasses[0] == 0 and sortedClasses[-1] == numClasses - 1):
+ return (data, origToNewLabels)
+ else:
+ reindexedData = \
+ data.map(lambda x: LabeledPoint(origToNewLabels[x.label],
x.features))
+ return (reindexedData, origToNewLabels)
+
+
+def usage():
+ print >> sys.stderr, \
+ "Usage: logistic_regression [libsvm format data filepath]\n" + \
--- End diff --
`logistic_regression` -> `tree` (or maybe we should change the name to
`decision_tree_runner.py` to match Scala's.
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