Github user neggert commented on the issue: https://github.com/apache/spark/pull/15018 Looks like the new scikit-learn implementation suffers from a similar problem to the one that the original Spark implementation had. I left them a note pointing it out. Right now I'm working on implementing what's in "Minimizing Separable Convex Functions Subject to Simple Chain Constraints", by Best, Chakravarti, and Ubhaya. Running down the referecence trail, it looks like the original algorithm is in "Projections onto Order Simplexes" by Grotzinger and Witzgall, and this particular formulation of it is originally in "Active set algorithms for isotonic regression; A unifying framework" by Best and Chakravarti.
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