Github user WeichenXu123 commented on a diff in the pull request:

    https://github.com/apache/spark/pull/19029#discussion_r135186430
  
    --- Diff: mllib/src/main/scala/org/apache/spark/ml/stat/Summarizer.scala ---
    @@ -438,6 +438,10 @@ private[ml] object SummaryBuilderImpl extends Logging {
             while (i < len) {
               realVariance(i) = (currM2n(i) + deltaMean(i) * deltaMean(i) * 
weightSum(i) *
                 (totalWeightSum - weightSum(i)) / totalWeightSum) / denominator
    +          // Because of numerical error, it is possible to get negative 
real variance
    +          if (realVariance(i) < 0.0) {
    --- End diff --
    
    Hmm.. `WeightedLeastSquares` use another way to compute variance `Var(X) = 
E(X^2) - E(X)^2`. But it seems also possible to have this problem.


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