GitHub user fjiang6 opened a pull request:
https://github.com/apache/spark/pull/4254
[SPARK-4259][MLlib]: Add Power Iteration Clustering Algorithm with Gaussian
Similarity Function
Add single pseudo-eigenvector PIC
Including documentations, one property file and updated pom.xml with the
following codes:
mllib/src/main/scala/org/apache/spark/mllib/clustering/PIClustering.scala
mllib/src/test/scala/org/apache/spark/mllib/clustering/PIClusteringSuite.scala
You can merge this pull request into a Git repository by running:
$ git pull https://github.com/Huawei-Spark/spark PIC
Alternatively you can review and apply these changes as the patch at:
https://github.com/apache/spark/pull/4254.patch
To close this pull request, make a commit to your master/trunk branch
with (at least) the following in the commit message:
This closes #4254
----
commit a3c5fbe3451b665968d503fa4ee52f1f6118252a
Author: Jiang Fan <fjia...@gmail.com>
Date: 2015-01-22T21:52:52Z
Adding Power Iteration Clustering
commit d5aae2032c08d097ed3c6cd61ed2612a55a619df
Author: Jiang Fan <fjia...@gmail.com>
Date: 2015-01-22T21:57:35Z
Adding Power Iteration Clustering and Suite test
commit 3fd5bc895f1594c57a182c31e010966affb47325
Author: sboeschhuawei <stephen.boe...@huawei.com>
Date: 2015-01-23T00:17:57Z
PIClustering is running in new branch (up to the pseudo-eigenvector
convergence step)
commit 0ef163f89ed82ed72967b51330e16ac3cf5759be
Author: sboeschhuawei <stephen.boe...@huawei.com>
Date: 2015-01-23T04:20:47Z
Added ConcentricCircles data generation and KMeans clustering
commit 32a90dc5570ea02ee25b80c4440293581416209c
Author: sboeschhuawei <stephen.boe...@huawei.com>
Date: 2015-01-23T16:48:00Z
Update circles test data values
commit 0700335d7b4fe9132046f034a67eb3405cd20953
Author: sboeschhuawei <stephen.boe...@huawei.com>
Date: 2015-01-23T22:30:53Z
First end to end working version: but has bad performance issue
commit e5df2b88c3668ecc4bc0cd25cde10dd033b9f72f
Author: sboeschhuawei <stephen.boe...@huawei.com>
Date: 2015-01-24T04:20:32Z
First end to end working PIC
commit 929426339d9934d61878880b2182bc5e18acee6c
Author: sboeschhuawei <stephen.boe...@huawei.com>
Date: 2015-01-25T11:00:07Z
Added visualization/plotting of input/output data
commit a2b1e5720266393a1813f0abe43c3709ebf46268
Author: sboeschhuawei <stephen.boe...@huawei.com>
Date: 2015-01-25T11:21:43Z
Revert inadvertent update to KMeans
commit b7dbcbe56767a8609314a20f24e907c426e827af
Author: sboeschhuawei <stephen.boe...@huawei.com>
Date: 2015-01-26T00:03:46Z
Added axes and combined into single plot for matplotlib
commit f656c349b059a7df1c6415e69c2010873ba4d2d4
Author: sboeschhuawei <stephen.boe...@huawei.com>
Date: 2015-01-26T00:04:10Z
Added iris dataset
commit a112f38d0476cee2bb5aa49311ce98b800141f8e
Author: sboeschhuawei <stephen.boe...@huawei.com>
Date: 2015-01-26T08:42:05Z
Added graphx main and test jars as dependencies to mllib/pom.xml
commit ace9749338c7454d17839dcf98ed75b131a21537
Author: Fan Jiang <fanjiang...@huawei.com>
Date: 2015-01-26T18:27:50Z
Update PIClustering.scala
commit b29c0dbf081d8baa30a3a83b57492bf92b2f4b6a
Author: Fan Jiang <fanjiang...@huawei.com>
Date: 2015-01-26T18:57:04Z
Update PIClustering.scala
commit bea48eaa0cca25695c283616d86235227357980c
Author: sboeschhuawei <stephen.boe...@huawei.com>
Date: 2015-01-27T00:58:57Z
Converted custom Linear Algebra datatypes/routines to use Breeze.
commit 90e7fa4b58b6d12f6b04dab3bf5f0a9d50f8d330
Author: sboeschhuawei <stephen.boe...@huawei.com>
Date: 2015-01-28T02:04:05Z
Converted from custom Linalg routines to Breeze: added JavaDoc comments;
added Markdown documentation
commit be659e31f5d9b1d35561ee43620f36d26732a950
Author: sboeschhuawei <stephen.boe...@huawei.com>
Date: 2015-01-28T02:06:53Z
Added mllib specific log4j
commit 060e6bf8d45a211a6b71e2cba8e4bf2b14b9e72a
Author: sboeschhuawei <stephen.boe...@huawei.com>
Date: 2015-01-28T06:49:12Z
Added link to PIC doc from the main clustering md doc
commit 24f438e9c72fcc77691fe5d70f01c1bb577ee874
Author: sboeschhuawei <stephen.boe...@huawei.com>
Date: 2015-01-28T06:50:29Z
fixed incorrect markdown in clustering doc
commit 88aacc8fa8aa955be2ec81caf001897b2bc91625
Author: sboeschhuawei <stephen.boe...@huawei.com>
Date: 2015-01-28T19:48:51Z
Add assert to testcase on cluster sizes
commit 43ab10be1c634f88d08f666df71ff15427e8a3d2
Author: sboeschhuawei <stephen.boe...@huawei.com>
Date: 2015-01-28T19:55:09Z
Change last two println's to log4j logger
commit 218a49d4e74b24bebf94033440904ca7411a28f0
Author: sboeschhuawei <stephen.boe...@huawei.com>
Date: 2015-01-28T20:38:04Z
Applied Xiangrui's comments - especially removing RDD/PICLinalg classes and
making noncritical methods private
commit 1c3a62ea8d45609e22bf2394a73930b1a334422d
Author: sboeschhuawei <stephen.boe...@huawei.com>
Date: 2015-01-28T21:23:52Z
removed matplot.py and reordered all private methods to bottom of PIC
commit 121e4d5fc0a0ab61a211fc71fea7a74775feb763
Author: sboeschhuawei <stephen.boe...@huawei.com>
Date: 2015-01-28T21:33:29Z
Remove unused testing data files
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