Revision: 570 http://rpy.svn.sourceforge.net/rpy/?rev=570&view=rev Author: lgautier Date: 2008-07-04 06:59:57 -0700 (Fri, 04 Jul 2008)
Log Message: ----------- moved file to the directory demos/ Added Paths: ----------- branches/rpy_nextgen/demos/example01.py Removed Paths: ------------- branches/rpy_nextgen/test.py Copied: branches/rpy_nextgen/demos/example01.py (from rev 569, branches/rpy_nextgen/test.py) =================================================================== --- branches/rpy_nextgen/demos/example01.py (rev 0) +++ branches/rpy_nextgen/demos/example01.py 2008-07-04 13:59:57 UTC (rev 570) @@ -0,0 +1,40 @@ +""" +short demo. + +Running this through ipython ends in a memory map +dump and a segfault. +""" + +import rpy2.robjects as robjects +import array + +r = robjects.r + +x = array.array('i', range(10)) +y = r.rnorm(10) + +r.X11() + +r.par(mfrow=array.array('i', [2,2])) +r.plot(x, y, ylab="foo/bar", col="red") + +kwargs = {'ylab':"foo/bar", 'type':"b", 'col':"blue", 'log':"x"} +r.plot(x, y, **kwargs) + + +m = r.matrix(r.rnorm(100), ncol=5) +pca = r.princomp(m) +r.plot(pca, main="Eigen values") +r.biplot(pca, main="biplot") + + +if not r.require("GO")[0]: + raise(Exception("Bioconductor Package GO missing")) + + +goItem = r.GOTERM["GO:0000001"] + +## goItem in an instance of an S4 class +## slots can be accessed as Python attributes +goItem.Term + Deleted: branches/rpy_nextgen/test.py =================================================================== --- branches/rpy_nextgen/test.py 2008-07-02 15:07:59 UTC (rev 569) +++ branches/rpy_nextgen/test.py 2008-07-04 13:59:57 UTC (rev 570) @@ -1,40 +0,0 @@ -""" -short demo. - -Running this through ipython ends in a memory map -dump and a segfault. -""" - -import rpy2.robjects as robjects -import array - -r = robjects.r - -x = array.array('i', range(10)) -y = r.rnorm(10) - -r.X11() - -r.par(mfrow=array.array('i', [2,2])) -r.plot(x, y, ylab="foo/bar", col="red") - -kwargs = {'ylab':"foo/bar", 'type':"b", 'col':"blue", 'log':"x"} -r.plot(x, y, **kwargs) - - -m = r.matrix(r.rnorm(100), ncol=5) -pca = r.princomp(m) -r.plot(pca, main="Eigen values") -r.biplot(pca, main="biplot") - - -if not r.require("GO")[0]: - raise(Exception("Bioconductor Package GO missing")) - - -goItem = r.GOTERM["GO:0000001"] - -## goItem in an instance of an S4 class -## slots can be accessed as Python attributes -goItem.Term - This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site. ------------------------------------------------------------------------- Sponsored by: SourceForge.net Community Choice Awards: VOTE NOW! Studies have shown that voting for your favorite open source project, along with a healthy diet, reduces your potential for chronic lameness and boredom. Vote Now at http://www.sourceforge.net/community/cca08 _______________________________________________ rpy-list mailing list rpy-list@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rpy-list