Hi,
Silly me!
I just checked svn, and I was using the rpy-2.0a3 tar ball.
All the .h files are missing in rpy/rinterfaces.
Nicholas
On Tue, 02 Sep 2008 09:56:41 -0700, "Nicholas Lewin-Koh"
<[EMAIL PROTECTED]> said:
> Hi,
> I had the similar problems with on ubuntu. When I set RHOME manually,
> export RHOME=/usr/local/lib64/R
> I got problems with finding one of the headers, specifically
> in rpy/interface/array.c
> changing
> #include "rinterface.h"
> to include #include <Rinterface.h>
>
> got around my first errors but I am noit sure that this is the header
> that is meant?
> the next error is a pointer error
>
> PyObject*
> array_struct_get(PySexpObject *self)
>
> which should be ok, so Rinterface.h is the wrong header.
> Of course i am at work and I was doing this on my home computer.
>
> Is setup.py supposed to create rinterface.h?
>
> Nicholas
>
> I noticed in
> On Tue, 2 Sep 2008 18:26:59 +0200, "Robert Nuske" <[EMAIL PROTECTED]> said:
> > Hi laurent,
> >
> >
> > > > I found them here:
> > > > /usr/share/R/include/Rdefines.h
> > > > /usr/share/R/include/Rinternals.h
> > > > /usr/share/R/include/R.h
> > >
> > > I may have seen that one problem mentioned earlier to the list.
> > me to, but can't find it now
> >
> > > The location of R's include files is seemingly a bit too exotic for the
> > > disutils script.
> > they were placed there by the debian package
> >
> > > The setup.py script expects them to be in ${RHOME}/include
> > > (RHOME being the outcome of running 'R RHOME').
> >
> > by googeling R_INCLUDE_DIR I found that it is not recommended to rely on
> > ${RHOME}/include
> >
> > eg.
> > http://www.nabble.com/Bug-354775%3A-r-base-core%3A-R-CMD-config-doesn%27t-reflect-new-file-locations-tp3175446p3175720.html
> >
> >
> > > There is currently no other way around that than either
> > > - edit setup.py
> > > - copy or link the headers.
> >
> > one way to get the include dirs
> > R CMD echo $R_INCLUDE_DIR
> >
> > but the recommed way of finding the include dirs seems to be:
> > R CMD config --cppflags
> >
> > on my system this returns
> > -I/usr/share/R/include -I/usr/share/R/include
> >
> > but I can't use it with get_rconfig, since get_rconfig checks for -l/-L
> > and
> > raises an ecxecption otherwise, more or less
> >
> >
> > If I hardcode the include dir in setup.py it finds the headers, but stops
> > with:
> >
> > [EMAIL PROTECTED]:/usr/local/src/rpy_nextgen$ python setup.py install
> > running install
> > running build
> > running build_py
> > running build_ext
> > building 'rpy2.rinterface.rinterface' extension
> > gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions
> > build/temp.linux-i686-2.5/rpy/rinterface/array.o
> > build/temp.linux-i686-2.5/rpy/rinterface/r_utils.o
> > build/temp.linux-i686-2.5/rpy/rinterface/rinterface.o -L/usr/lib/R/lib
> > -L/usr/lib/R/modules -Wl,-R/usr/lib/R/lib -Wl,-R/usr/lib/R/modules -lR
> > -lRlapack -lRblas -o
> > build/lib.linux-i686-2.5/rpy2/rinterface/rinterface.so -L/usr/lib/R/lib
> > -lR -llapack -lblas
> > /usr/bin/ld: cannot find -lRlapack
> > collect2: ld returned 1 exit status
> > error: command 'gcc' failed with exit status 1
> >
> >
> > cheers,
> > robert
> >
> > -------------------------------------------------------------------------
> > This SF.Net email is sponsored by the Moblin Your Move Developer's
> > challenge
> > Build the coolest Linux based applications with Moblin SDK & win great
> > prizes
> > Grand prize is a trip for two to an Open Source event anywhere in the
> > world
> > http://moblin-contest.org/redirect.php?banner_id=100&url=/
> > _______________________________________________
> > rpy-list mailing list
> > rpy-list@lists.sourceforge.net
> > https://lists.sourceforge.net/lists/listinfo/rpy-list
>
> -------------------------------------------------------------------------
> This SF.Net email is sponsored by the Moblin Your Move Developer's
> challenge
> Build the coolest Linux based applications with Moblin SDK & win great
> prizes
> Grand prize is a trip for two to an Open Source event anywhere in the
> world
> http://moblin-contest.org/redirect.php?banner_id=100&url=/
> _______________________________________________
> rpy-list mailing list
> rpy-list@lists.sourceforge.net
> https://lists.sourceforge.net/lists/listinfo/rpy-list
-------------------------------------------------------------------------
This SF.Net email is sponsored by the Moblin Your Move Developer's challenge
Build the coolest Linux based applications with Moblin SDK & win great prizes
Grand prize is a trip for two to an Open Source event anywhere in the world
http://moblin-contest.org/redirect.php?banner_id=100&url=/
_______________________________________________
rpy-list mailing list
rpy-list@lists.sourceforge.net
https://lists.sourceforge.net/lists/listinfo/rpy-list
